RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CLCNKBP51801 687 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 SIGLEC14Q08ET2 396 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 SF3A1Q15459 793 aaKnown RBP20.09■□□□□ 0.81
FXN-203ENST00000396366 ZNF568Q3ZCX4 644 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 LILRA6Q6PI73 481 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 TDRD5Q8NAT2 981 aaKnown RBP20.09■□□□□ 0.81
FXN-203ENST00000396366 ASIC4Q96FT7 647 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 MFSD14AQ96MC6 490 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 TCHPQ9BT92 498 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 FNIP2Q9P278 1114 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
FXN-203ENST00000396366 MUC6Q6W4X9 2439 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 MTCL1Q9Y4B5 1905 aaKnown RBP20.09■□□□□ 0.81
FXN-203ENST00000396366 ZNF318Q5VUA4 2279 aa20.09■□□□□ 0.81
FXN-203ENST00000396366 VWA8A3KMH1 1905 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 SMIM28A0A1B0GU29 152 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 ADAM12O43184 909 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 BRD1O95696 1058 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 PROZP22891 400 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 GRM5P41594 1212 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 SOX4Q06945 474 aaPredicted RBP20.08■□□□□ 0.81
FXN-203ENST00000396366 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
FXN-203ENST00000396366 SEZ6Q53EL9 994 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 ALKAL1Q6UXT8 129 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 BMP8AQ7Z5Y6 402 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 ZDHHC14Q8IZN3 488 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 TMEM161BQ8NDZ6 487 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 LNX1Q8TBB1 728 aaPredicted RBP20.08■□□□□ 0.81
FXN-203ENST00000396366 SPIRE2Q8WWL2 714 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 ZMAT2Q96NC0 199 aaKnown RBP20.08■□□□□ 0.81
FXN-203ENST00000396366 CLSTN3Q9BQT9 956 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 TTPALQ9BTX7 342 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 TIPINQ9BVW5 301 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 C17orf75Q9HAS0 396 aa20.08■□□□□ 0.81
FXN-203ENST00000396366 MAPTP10636 758 aaKnown RBP20.07■□□□□ 0.8
FXN-203ENST00000396366 HARSP12081 509 aaKnown RBP20.07■□□□□ 0.8
FXN-203ENST00000396366 UBA7P41226 1012 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 FAM173BQ6P4H8 233 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 C15orf39Q6ZRI6 1047 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 BRAPQ7Z569 592 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 C3orf58Q8NDZ4 430 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
FXN-203ENST00000396366 ZNF707Q96C28 371 aaPredicted RBP20.07■□□□□ 0.8
FXN-203ENST00000396366 AK8Q96MA6 479 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.07■□□□□ 0.8
FXN-203ENST00000396366 SORCS3Q9UPU3 1222 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 USTQ9Y2C2 406 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 CLIC4Q9Y696 253 aa20.07■□□□□ 0.8
FXN-203ENST00000396366 I3L4J1 428 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 N4BP1O75113 896 aaKnown RBP20.06■□□□□ 0.8
FXN-203ENST00000396366 B3GAT3O94766 335 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 PDGFBP01127 241 aaPredicted RBP20.06■□□□□ 0.8
FXN-203ENST00000396366 MCF2P10911 925 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 KARSQ15046 597 aaKnown RBP20.06■□□□□ 0.8
FXN-203ENST00000396366 UPP1Q16831 310 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 XKR4Q5GH76 650 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 IER5LQ5T953 404 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 DCLRE1AQ6PJP8 1040 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 MPZL3Q6UWV2 235 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 CCDC149Q6ZUS6 474 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 APBB1IPQ7Z5R6 666 aaPredicted RBP20.06■□□□□ 0.8
FXN-203ENST00000396366 GPR65Q8IYL9 337 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 KCTD17Q8N5Z5 321 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 CCDC94Q9BW85 323 aaPredicted RBP20.06■□□□□ 0.8
FXN-203ENST00000396366 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 BLOC1S4Q9NUP1 217 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 ANKFY1Q9P2R3 1169 aa20.06■□□□□ 0.8
FXN-203ENST00000396366 BRCC3P46736 316 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 SMTNP53814 917 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 YARSP54577 528 aaKnown RBP20.05■□□□□ 0.8
FXN-203ENST00000396366 STRN3Q13033 797 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 MCM6Q14566 821 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 PSMD5Q16401 504 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 SPECC1Q5M775 1068 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 USP49Q70CQ1 688 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 GPBP1Q86WP2 473 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 PLCD3Q8N3E9 789 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 TMEM130Q8N3G9 435 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 PIK3R5Q8WYR1 880 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 SMG7Q92540 1137 aaKnown RBP20.05■□□□□ 0.8
FXN-203ENST00000396366 C18orf25Q96B23 403 aaPredicted RBP20.05■□□□□ 0.8
FXN-203ENST00000396366 CALML4Q96GE6 196 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 ACAP3Q96P50 834 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 REEP2Q9BRK0 252 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 HAPLN2Q9GZV7 340 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 KCND2Q9NZV8 630 aa20.05■□□□□ 0.8
FXN-203ENST00000396366 DOCK6Q96HP0 2047 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 PLCG1P19174 1290 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 SYT1P21579 422 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 LONP1P36776 959 aaKnown RBP20.04■□□□□ 0.8
FXN-203ENST00000396366 MTMR3Q13615 1198 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 RSPO2Q6UXX9 243 aaPredicted RBP20.04■□□□□ 0.8
FXN-203ENST00000396366 OTOP3Q7RTS5 596 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 FBXL6Q8N531 539 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 HDAC7Q8WUI4 952 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 ACSF2Q96CM8 615 aaPredicted RBP20.04■□□□□ 0.8
FXN-203ENST00000396366 SNX27Q96L92 541 aa20.04■□□□□ 0.8
FXN-203ENST00000396366 PLEKHA4Q9H4M7 779 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms