RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 KCTD17Q8N5Z5 321 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 SHDQ96IW2 340 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 KMT5AQ9NQR1 393 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 FAM86C1Q9NVL1 165 aa17.99■□□□□ 0.47
DDR1-229ENST00000396342 KIF4AO95239 1232 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 CFHP08603 1231 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 MATR3P43243 847 aaKnown RBP eCLIP17.98■□□□□ 0.47
DDR1-229ENST00000396342 PEX3P56589 373 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 UVSSAQ2YD98 709 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 RILPL1Q5EBL4 403 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 MTSS1LQ765P7 747 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 RTL10Q7L3V2 364 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 GSTCDQ8NEC7 633 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 TNFSF13BQ9Y275 285 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 NUB1Q9Y5A7 615 aa17.98■□□□□ 0.47
DDR1-229ENST00000396342 F8W810 466 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 H0YCG3 227 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 C8AP07357 584 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 SRFP11831 508 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 LAMP2P13473 410 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 AOC1P19801 751 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDR1-229ENST00000396342 PRPHP41219 470 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 RABEP1Q15276 862 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 RTP2Q5QGT7 225 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 TMEM105Q8N8V8 129 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 ACAP3Q96P50 834 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 CCDC113Q9H0I3 377 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 SMOC2Q9H3U7 446 aa17.97■□□□□ 0.47
DDR1-229ENST00000396342 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.97■□□□□ 0.47
DDR1-229ENST00000396342 WDR81Q562E7 1941 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 H7C4K7 107 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 EFEMP2O95967 443 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 HOXA9P31269 272 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 OR1D2P34982 312 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 LILRA6Q6PI73 481 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 SLC44A3Q8N4M1 653 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 IGSF22Q8N9C0 903 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 RASSF8Q8NHQ8 419 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 KIFC3Q9BVG8 833 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 TMEM134Q9H6X4 195 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 FBXW11Q9UKB1 542 aa17.96■□□□□ 0.47
DDR1-229ENST00000396342 ZDBF2Q9HCK1 2354 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 TMEM189-UBE2V1I3L0A0 370 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 PRRG1O14668 218 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 PTGESO14684 152 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 SEC24BO95487 1268 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 MCF2P10911 925 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 GRM5P41594 1212 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 NPTX2P47972 431 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 GLRA4Q5JXX5 417 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 EEF1DP3Q658K8 133 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 GRASPQ7Z6J2 395 aaPredicted RBP17.95■□□□□ 0.46
DDR1-229ENST00000396342 ELMOD1Q8N336 334 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 LNX1Q8TBB1 728 aaPredicted RBP17.95■□□□□ 0.46
DDR1-229ENST00000396342 SLC7A14Q8TBB6 771 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 NKD2Q969F2 451 aaPredicted RBP17.95■□□□□ 0.46
DDR1-229ENST00000396342 ZNF707Q96C28 371 aaPredicted RBP17.95■□□□□ 0.46
DDR1-229ENST00000396342 BICD1Q96G01 975 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 MYADMQ96S97 322 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 PAAF1Q9BRP4 392 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 CDH7Q9ULB5 785 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 CA14Q9ULX7 337 aa17.95■□□□□ 0.46
DDR1-229ENST00000396342 CCL16O15467 120 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 HIP1RO75146 1068 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 LRG1P02750 347 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 HARSP12081 509 aaKnown RBP17.94■□□□□ 0.46
DDR1-229ENST00000396342 MARCKSP29966 332 aaPredicted RBP17.94■□□□□ 0.46
DDR1-229ENST00000396342 OSTNP61366 133 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 PFKPQ01813 784 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 RAB33AQ14088 237 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 AXDND1Q5T1B0 1012 aaPredicted RBP17.94■□□□□ 0.46
DDR1-229ENST00000396342 DTWD2Q8NBA8 298 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 KCNG4Q8TDN1 519 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 RSAD2Q8WXG1 361 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 PHOX2BQ99453 314 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 CLSTN3Q9BQT9 956 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 KCND2Q9NZV8 630 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
DDR1-229ENST00000396342 SMIM28A0A1B0GU29 152 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 E9PMD0 336 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 RPL9P32969 192 aaKnown RBP17.93■□□□□ 0.46
DDR1-229ENST00000396342 MCM2P49736 904 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 NBR1Q14596 966 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 KYAT1Q16773 422 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 PABPC1LQ4VXU2 614 aaKnown RBP17.93■□□□□ 0.46
DDR1-229ENST00000396342 NT5DC1Q5TFE4 455 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 ZC3H14Q6PJT7 736 aaKnown RBP17.93■□□□□ 0.46
DDR1-229ENST00000396342 MPZL3Q6UWV2 235 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 CCDC105Q8IYK2 499 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 CALML4Q96GE6 196 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 ACO2Q99798 780 aaKnown RBP17.93■□□□□ 0.46
DDR1-229ENST00000396342 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 ARHGEF3Q9NR81 526 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 LARSQ9P2J5 1176 aaKnown RBP17.93■□□□□ 0.46
DDR1-229ENST00000396342 CACNG4Q9UBN1 327 aa17.93■□□□□ 0.46
DDR1-229ENST00000396342 USP20Q9Y2K6 914 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms