RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 GSC2O15499 205 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CCDC22O60826 627 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 ZWINTO95229 277 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 PSMG1O95456 288 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 ECEL1O95672 775 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 ABHD2P08910 425 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 USP17L8P0C7I0 530 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 SPDYE6P0CI01 402 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 GOLGA8HP0CJ92 632 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 PIM1P11309 404 aaPredicted RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 RPL13P26373 211 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 KCNJ1P48048 391 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 SERPINB4P48594 390 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 MARCKSL1P49006 195 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CLK2P49760 499 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 NR1H3Q13133 447 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 DNAJC3Q13217 504 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 DRAP1Q14919 205 aaPredicted RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 RCN1Q15293 331 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 ZRSR2Q15696 482 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 KYNUQ16719 465 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CNPY1Q3B7I2 92 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 SPDYE2Q495Y8 402 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CAVIN4Q5BKX8 364 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 HHATQ5VTY9 493 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 RFWD3Q6PCD5 774 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CLNKQ7Z7G1 428 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 TRABD2AQ86V40 505 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 CCDC25Q86WR0 208 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 TDRPQ86YL5 185 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 SRRM1Q8IYB3 904 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 PLEKHG4BQ96PX9 1271 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 ZNF184Q99676 751 aaPredicted RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 BTBD10Q9BSF8 475 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 OCEL1Q9H607 264 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 SYNCQ9H7C4 482 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 DNAJC18Q9H819 358 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 MCM9Q9NXL9 1143 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 STK32BQ9NY57 414 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 NINJ2Q9NZG7 142 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 LARSQ9P2J5 1176 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 PCDHA12Q9UN75 941 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 MINPP1Q9UNW1 487 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 GMEB1Q9Y692 573 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 COMMD3-BMI1R4GMX3 469 aa6.73□□□□□ -1.33
NXF3-201ENST00000395065 TNRC6CQ9HCJ0 1690 aaKnown RBP6.73□□□□□ -1.33
NXF3-201ENST00000395065 ASTN1O14525 1302 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 BTAF1O14981 1849 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 NPHP3-ACAD11A0A0J9YXS1 232 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 A8MXQ7 604 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CAPN9O14815 690 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 SORBS3O60504 671 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CYP1A1P04798 512 aaPredicted RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 LYNP07948 512 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 FAM163BP0C2L3 166 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 TSPY3P0CV98 308 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 TSPY8P0CW00 308 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 TNFAIP3P21580 790 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 COMTP21964 271 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CASP4P49662 377 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CDR2Q01850 454 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 MCL1Q07820 350 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 USP4Q13107 963 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PTK6Q13882 451 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 SPARCL1Q14515 664 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CCDC6Q16204 474 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 LIN52Q52LA3 116 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 ZC2HC1CQ53FD0 456 aaPredicted RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 TAF1BQ53T94 588 aaPredicted RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 DCAF17Q5H9S7 520 aaPredicted RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 ZNF449Q6P9G9 518 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 NLRP9Q7RTR0 991 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 LCA5Q86VQ0 697 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 GPBP1Q86WP2 473 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PALB2Q86YC2 1186 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CCDC125Q86Z20 511 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 LARGE2Q8N3Y3 721 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PPFIBP2Q8ND30 876 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PTCD3Q96EY7 689 aaKnown RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 SNF8Q96H20 258 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 GBP5Q96PP8 586 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PIGSQ96S52 555 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 TRAIPQ9BWF2 469 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 CPVLQ9H3G5 476 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 SLCO1B3Q9NPD5 702 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
NXF3-201ENST00000395065 IL1RAPL1Q9NZN1 696 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 ZFP69BQ9UJL9 534 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 DNAJC12Q9UKB3 198 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 KIAA1024Q9UPX6 916 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 PTPN22Q9Y2R2 807 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 NEU2Q9Y3R4 380 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 STK24Q9Y6E0 443 aa6.72□□□□□ -1.33
NXF3-201ENST00000395065 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms