RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 GUCY2FP51841 1108 aa15□□□□□ -0.01
SNCA-204ENST00000394989 GCNT1Q02742 428 aa15□□□□□ -0.01
SNCA-204ENST00000394989 ZNF211Q13398 564 aaPredicted RBP15□□□□□ -0.01
SNCA-204ENST00000394989 PSMD6Q15008 389 aa15□□□□□ -0.01
SNCA-204ENST00000394989 LY6KQ17RY6 165 aa15□□□□□ -0.01
SNCA-204ENST00000394989 USP37Q86T82 979 aa15□□□□□ -0.01
SNCA-204ENST00000394989 CPNE8Q86YQ8 564 aa15□□□□□ -0.01
SNCA-204ENST00000394989 SLC7A3Q8WY07 619 aa15□□□□□ -0.01
SNCA-204ENST00000394989 TTLL13PA6NNM8 815 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 PIGRP01833 764 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 MAGEA9P43362 315 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 TDRD10Q5VZ19 366 aaKnown RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 NAA35Q5VZE5 725 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 DDX42Q86XP3 938 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNCA-204ENST00000394989 PIK3R5Q8WYR1 880 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 TARS2Q9BW92 718 aaKnown RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 TAF1DQ9H5J8 278 aaPredicted RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 AGO2Q9UKV8 859 aaKnown RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 SOCS7O14512 581 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 MTA2O94776 668 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 C4BPAP04003 597 aaKnown RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 PDE6CP51160 858 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 STRN3Q13033 797 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 ZACNQ401N2 412 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 CELF4Q9BZC1 486 aaKnown RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 NEUROG2Q9H2A3 272 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 ERVK-5Q9HDB9 667 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 K7ERI5 159 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 VNN1O95497 513 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 PGK2P07205 417 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 COPB2P35606 906 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 TCF7P36402 384 aaPredicted RBP14.99□□□□□ -0.01
SNCA-204ENST00000394989 CAPSQ13938 189 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 SCARA3Q6AZY7 606 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 IQCKQ8N0W5 287 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 BTBD6Q96KE9 485 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 ADGRA2Q96PE1 1338 aa14.99□□□□□ -0.01
SNCA-204ENST00000394989 TTI1O43156 1089 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 GGPS1O95749 300 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 ABCD1P33897 745 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 STAT5BP51692 787 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 Q3C1V9 767 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 SPOPLQ6IQ16 392 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 MREGQ8N565 214 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 DEPTORQ8TB45 409 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 AFAP1L1Q8TED9 768 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 CD101Q93033 1021 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 KIAA1586Q9HCI6 787 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
SNCA-204ENST00000394989 CYP1A2P05177 515 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 COMTP21964 271 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 PEX5P50542 639 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 MNAT1P51948 309 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 MOGSQ13724 837 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 ADAT2Q7Z6V5 191 aaKnown RBP14.98□□□□□ -0.01
SNCA-204ENST00000394989 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
SNCA-204ENST00000394989 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 ANKFY1Q9P2R3 1169 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
SNCA-204ENST00000394989 A0A0B4J269 797 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 TMEM110-MUSTN1A8MSY1 372 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ZC3H11AO75152 810 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNCA-204ENST00000394989 KRT5P13647 590 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 TNNI1P19237 187 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 IREB2P48200 963 aaKnown RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 NEDD9Q14511 834 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 MESDQ14696 234 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 HSDL1Q3SXM5 330 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ALS2CLQ60I27 953 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 SEC14L1Q92503 715 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 NUP85Q9BW27 656 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 SLITRK6Q9H5Y7 841 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 HLA-DRAP01903 254 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 TGFB3P10600 412 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 SEZ6Q53EL9 994 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ZDHHC14Q8IZN3 488 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 ZSWIM1Q9BR11 485 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 FHDC1Q9C0D6 1143 aaPredicted RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 RBPJLQ9UBG7 517 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 KCNG1Q9UIX4 513 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 GTF3C4Q9UKN8 822 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 SPDYE5A6NIY4 337 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 MAFO75444 373 aaPredicted RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 KRT14P02533 472 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 RFC5P40937 340 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 CCT5P48643 541 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 PTENP60484 403 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 TTMPQ5BVD1 217 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 TRIM50Q86XT4 487 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 EIF1ADQ8N9N8 165 aaKnown RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 ZNF564Q8TBZ8 553 aaPredicted RBP14.97□□□□□ -0.01
SNCA-204ENST00000394989 ARL8AQ96BM9 186 aa14.97□□□□□ -0.01
SNCA-204ENST00000394989 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms