RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 XBP1P17861 261 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 ATXN1P54253 815 aaKnown RBP21.84■■□□□ 1.09
UPK3B-203ENST00000394849 CAPSQ13938 189 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 NCAPH2Q6IBW4 605 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 ZNF852Q6ZMS4 543 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 CCDC43Q96MW1 224 aaKnown RBP21.84■■□□□ 1.09
UPK3B-203ENST00000394849 RTKNQ9BST9 563 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 GDE1Q9NZC3 331 aa21.84■■□□□ 1.09
UPK3B-203ENST00000394849 SMG5Q9UPR3 1016 aaKnown RBP21.84■■□□□ 1.09
UPK3B-203ENST00000394849 MTF2Q9Y483 593 aaPredicted RBP21.84■■□□□ 1.09
UPK3B-203ENST00000394849 CCL16O15467 120 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 ECI2O75521 394 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 SLITRK3O94933 977 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 NTHL1P78549 312 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 CYP4A11Q02928 519 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 RAB33AQ14088 237 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 CTTNQ14247 550 aaKnown RBP21.83■■□□□ 1.09
UPK3B-203ENST00000394849 PABPC1LQ4VXU2 614 aaKnown RBP21.83■■□□□ 1.09
UPK3B-203ENST00000394849 AXDND1Q5T1B0 1012 aaPredicted RBP21.83■■□□□ 1.09
UPK3B-203ENST00000394849 CEP57Q86XR8 500 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 ST13P5Q8NFI4 369 aaPredicted RBP21.83■■□□□ 1.09
UPK3B-203ENST00000394849 KLK14Q9P0G3 267 aa21.83■■□□□ 1.09
UPK3B-203ENST00000394849 ZBTB39O15060 712 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 THP07101 528 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 NRLP54845 237 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 SPIRE1Q08AE8 756 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 PPP2R5DQ14738 602 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 RUFY3Q7L099 469 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 NPAS3Q8IXF0 933 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 ITFG1Q8TB96 612 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 SLC7A14Q8TBB6 771 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 ASAP3Q8TDY4 903 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 RABGGTAQ92696 567 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 KXD1Q9BQD3 176 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 IER2Q9BTL4 223 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 PRMT8Q9NR22 394 aaPredicted RBP21.82■■□□□ 1.08
UPK3B-203ENST00000394849 PRMT7Q9NVM4 692 aaPredicted RBP21.82■■□□□ 1.08
UPK3B-203ENST00000394849 GMEB2Q9UKD1 530 aa21.82■■□□□ 1.08
UPK3B-203ENST00000394849 B4GALT5O43286 388 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 CDKL5O76039 1030 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 KIF4AO95239 1232 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 GLRA2P23416 452 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 ADCY1Q08828 1119 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.81■■□□□ 1.08
UPK3B-203ENST00000394849 PPP4R3CPQ6ZMV5 832 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 MAMSTRQ6ZN01 415 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 TPRG1Q6ZUI0 275 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 PAAF1Q9BRP4 392 aa21.81■■□□□ 1.08
UPK3B-203ENST00000394849 AVENQ9NQS1 362 aaPredicted RBP21.81■■□□□ 1.08
UPK3B-203ENST00000394849 XRCC6P12956 609 aaKnown RBP eCLIP21.8■■□□□ 1.08
UPK3B-203ENST00000394849 TOB2Q14106 344 aaPredicted RBP21.8■■□□□ 1.08
UPK3B-203ENST00000394849 DNASE1L2Q92874 299 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 HSD17B14Q9BPX1 270 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 EIF2AK1Q9BQI3 630 aaKnown RBP21.8■■□□□ 1.08
UPK3B-203ENST00000394849 ZSWIM6Q9HCJ5 1215 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 RAB23Q9ULC3 237 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 PCDHA12Q9UN75 941 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 KCNJ14Q9UNX9 436 aa21.8■■□□□ 1.08
UPK3B-203ENST00000394849 MRPS23Q9Y3D9 190 aaKnown RBP21.8■■□□□ 1.08
UPK3B-203ENST00000394849 NOTCH4Q99466 2003 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 CASTOR2A6NHX0 329 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 MAN2B1O00754 1011 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 N4BP3O15049 544 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
UPK3B-203ENST00000394849 CD72P21854 359 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 TARSP26639 723 aaKnown RBP21.79■■□□□ 1.08
UPK3B-203ENST00000394849 FAM187BQ17R55 369 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 PIK3AP1Q6ZUJ8 805 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 POTEDQ86YR6 584 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 ZBTB8OSQ8IWT0 167 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 HASPINQ8TF76 798 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 AIFM3Q96NN9 605 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 DNMT3BQ9UBC3 853 aaKnown RBP21.79■■□□□ 1.08
UPK3B-203ENST00000394849 USP18Q9UMW8 372 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 CYP46A1Q9Y6A2 500 aa21.79■■□□□ 1.08
UPK3B-203ENST00000394849 OR1D2P34982 312 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 RBM25P49756 843 aaKnown RBP21.78■■□□□ 1.08
UPK3B-203ENST00000394849 RARRES1P49788 294 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 CDR2LQ86X02 465 aaPredicted RBP21.78■■□□□ 1.08
UPK3B-203ENST00000394849 ELSPBP1Q96BH3 223 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 ADPGKQ9BRR6 497 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 POLR3FQ9H1D9 316 aaPredicted RBP21.78■■□□□ 1.08
UPK3B-203ENST00000394849 C2orf40Q9H1Z8 148 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 MTRRQ9UBK8 725 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 BACE2Q9Y5Z0 518 aa21.78■■□□□ 1.08
UPK3B-203ENST00000394849 VWA8A3KMH1 1905 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 LRRIQ4A6NIV6 560 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 TMEM189-UBE2V1I3L0A0 370 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 PTGESO14684 152 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 ADAM12O43184 909 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 TRAPPC3O43617 180 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 LRP3O75074 770 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 KRT37O76014 449 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 FGFR3P22607 806 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 CELF5Q8N6W0 485 aaKnown RBP21.77■■□□□ 1.08
UPK3B-203ENST00000394849 MCPH1Q8NEM0 835 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 FZD8Q9H461 694 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 HCFC1R1Q9NWW0 138 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 CACNG4Q9UBN1 327 aa21.77■■□□□ 1.08
UPK3B-203ENST00000394849 TGM1P22735 817 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms