RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NCALDP61601 193 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 SCARA5Q6ZMJ2 495 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ANKRD35Q8N283 1001 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 FITM2Q8N6M3 262 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SLC5A5Q92911 643 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 NSUN4Q96CB9 384 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 BLOC1S4Q9NUP1 217 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 CFAP73A6NFT4 308 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.912e-35■□□□□ 10.1
RTN4-206ENST00000394611 ATP9AO75110 1047 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 HAUS5O94927 633 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ZSCAN5DPP0CG00 497 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 BFSP1Q12934 665 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PDIA2Q13087 525 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 MAPK7Q13164 816 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ECM1Q16610 540 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 AOC3Q16853 763 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SCYL2Q6P3W7 929 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ARHGAP27Q6ZUM4 889 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CCNJLQ8IV13 435 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SCFD1Q8WVM8 642 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CCT6BQ92526 530 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 ALG3Q92685 438 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 RUNDC3BQ96NL0 473 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 RBM15Q96T37 977 aaKnown RBP eCLIP9.38□□□□□ -0.914e-8■■■■■ 30.1
RTN4-206ENST00000394611 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 KIFC3Q9BVG8 833 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 IFT122Q9HBG6 1241 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ATP8A2Q9NTI2 1148 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 TMOD2Q9NZR1 351 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 TTLL3Q9Y4R7 772 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 LTBP1Q14766 1721 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 MEI4A8MW99 385 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 KRT36O76013 467 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 TCN1P20061 433 aaPredicted RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SLMAPQ14BN4 828 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CYTH1Q15438 398 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ANO4Q32M45 955 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 P3H1Q32P28 736 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 FNBP1Q96RU3 617 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 TMEM117Q9H0C3 514 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SLITRK6Q9H5Y7 841 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 IL17RBQ9NRM6 502 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ANKFY1Q9P2R3 1169 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 AK5Q9Y6K8 562 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SNED1Q8TER0 1413 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 A0A1B0GVG6 124 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 NFKBIEO00221 500 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 PYGMP11217 842 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 AKR1B1P15121 316 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CHKAP35790 457 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SCNN1BP51168 640 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 SMTNL2Q2TAL5 461 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 AGBL2Q5U5Z8 902 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 NXNQ6DKJ4 435 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 LVRNQ6Q4G3 990 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 CALN1Q9BXU9 219 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
RTN4-206ENST00000394611 PCSK1NQ9UHG2 260 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 MAD2L2Q9UI95 211 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 IGSF9BQ9UPX0 1349 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 SYNJ2BP-COX16A0A087WUM0 186 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CCDC78A2IDD5 438 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 I3L4J1 428 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 SNX3O60493 162 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 USP1O94782 785 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 SERPINB3P29508 390 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 RWDD2BP57060 319 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 OSTNP61366 133 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 TMPRSS15P98073 1019 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 SPARCL1Q14515 664 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 ACAP1Q15027 740 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CLUL1Q15846 466 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 GPR162Q16538 588 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 ERMARDQ5T6L9 678 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CCHCR1Q8TD31 782 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 COX16Q9P0S2 106 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms