RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ARFGAP3Q9NP61 516 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ZNHIT6Q9NWK9 470 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 GJD2Q9UKL4 321 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 MCM3APO60318 1980 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CA12O43570 354 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 HBP1O60381 514 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 AOC2O75106 756 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PPFIA4O75335 1185 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TBC1D8O95759 1140 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ADRB2P07550 413 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PLEKP08567 350 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 BMP2P12643 396 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 KRT13P13646 458 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TNNT3P45378 269 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 FMO5P49326 533 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 LIG4P49917 911 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CLCN3P51790 818 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 VAMP7P51809 220 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ARID5AQ03989 594 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 LAMTOR4Q0VGL1 99 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 STRN3Q13033 797 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PPP2R5AQ15172 486 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ENOX2Q16206 610 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 SNRNP35Q16560 246 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 BRDTQ58F21 947 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 EFCAB12Q6NXP0 572 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 CC2D1AQ6P1N0 951 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 GJB7Q6PEY0 223 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 SYT10Q6XYQ8 523 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 GBP6Q6ZN66 633 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 C12orf56Q8IXR9 622 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 MEIOBQ8N635 442 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 RNF149Q8NC42 400 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PLEKHO2Q8TD55 490 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 PSPC1Q8WXF1 523 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 USP6NLQ92738 828 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ZBTB45Q96K62 511 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 NLRP4Q96MN2 994 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 C16orf70Q9BSU1 422 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 FAM117AQ9C073 453 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 ARHGAP39Q9C0H5 1083 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 LZTFL1Q9NQ48 299 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.22e-8■■■■■ 58.6
RTN4-205ENST00000394609 GCNT4Q9P109 453 aa7.53□□□□□ -1.2
RTN4-205ENST00000394609 SUCLA2Q9P2R7 463 aaPredicted RBP7.53□□□□□ -1.2
RTN4-205ENST00000394609 IGKV6-21A0A0C4DH24 114 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 H0YCG3 227 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 H3BRB1 525 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 MYO1CO00159 1063 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 MAP2K7O14733 419 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 ADCY3O60266 1144 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 LRRN2O75325 713 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 TOMM70O94826 608 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 EDN1P05305 212 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 MMP3P08254 477 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 HOXC6P09630 235 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 CCDC175P0C221 793 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 ZNF865P0CJ78 1059 aaPredicted RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 KLRC1P26715 233 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 ACTN2P35609 894 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 RGS2P41220 211 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 GRM5P41594 1212 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 NOP2P46087 812 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 GCLMP48507 274 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 SNRPFP62306 86 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 PPP3CAQ08209 521 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 SMC1AQ14683 1233 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 MEA1Q16626 185 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 KLHDC7AQ5VTJ3 777 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 IER5Q5VY09 327 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 OLFML2BQ68BL8 750 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 DPY19L2P1Q6NXN4 242 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 PDXDC1Q6P996 788 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 TRIM65Q6PJ69 517 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 INTS8Q75QN2 995 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 RSRC2Q7L4I2 434 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 IQCDQ96DY2 449 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 PPP1R16BQ96T49 567 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 FAM213AQ9BRX8 229 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 GANQ9H2C0 597 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 TUT1Q9H6E5 874 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 NHEJ1Q9H9Q4 299 aaPredicted RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 CEP72Q9P209 647 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 ANKFY1Q9P2R3 1169 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 KCNG1Q9UIX4 513 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 TFR2Q9UP52 801 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 PLAGL2Q9UPG8 496 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 EPN1Q9Y6I3 576 aaPredicted RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.21
RTN4-205ENST00000394609 ZNFX1Q9P2E3 1918 aaKnown RBP7.52□□□□□ -1.21
RTN4-205ENST00000394609 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
RTN4-205ENST00000394609 LILRB3O75022 631 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms