RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TMEM161BQ8NDZ6 487 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 JPH2Q9BR39 696 aaPredicted RBP14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 TMEM206Q9H813 350 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 ZNF862O60290 1169 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 GJB6O95452 261 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 CHN1P15882 459 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 CTNNA2P26232 953 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 CATSPERGQ6ZRH7 1159 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 CCDC105Q8IYK2 499 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 PARD3BQ8TEW8 1205 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 SHC3Q92529 594 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 SEC16BQ96JE7 1060 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 C12orf42Q96LP6 360 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 PABPC3Q9H361 631 aaKnown RBP14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 TBX20Q9UMR3 447 aa14.46□□□□□ -0.09
GTF2F1-201ENST00000394456 WDR90Q96KV7 1748 aa14.46□□□□□ -0.1
GTF2F1-201ENST00000394456 C19orf81C9J6K1 198 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 TP73O15350 636 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 GRIN3BO60391 1043 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 FDX1P10109 184 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 KRT5P13647 590 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 VPS41P49754 854 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 SPOPLQ6IQ16 392 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 OTUD6AQ7L8S5 288 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 VSIG10LQ86VR7 867 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 SLC13A5Q86YT5 568 aaPredicted RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 UBL4BQ8N7F7 174 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 CPA5Q8WXQ8 436 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 DDX1Q92499 740 aaKnown RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 A1CFQ9NQ94 594 aaKnown RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 CHST7Q9NS84 486 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 WDR64B1ANS9 1081 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 DRD4P21917 467 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 CCND2P30279 289 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 CHKAP35790 457 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 COILP38432 576 aaPredicted RBP14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 IFNAR2P48551 515 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 MLXIPLQ9NP71 852 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 AFG3L2Q9Y4W6 797 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 LCTP09848 1927 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 PTPRFP10586 1907 aa14.45□□□□□ -0.1
GTF2F1-201ENST00000394456 ADM5C9JUS6 153 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 RGS20O76081 388 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 NCKAP1LP55160 1127 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 VGLL4Q14135 290 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 DENND2CQ68D51 928 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 SV2AQ7L0J3 742 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 ARFGAP2Q8N6H7 521 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 TEX13BQ9BXU2 312 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 CCDC113Q9H0I3 377 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 CTNNAL1Q9UBT7 734 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 ADAMTS5Q9UNA0 930 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 MYH9P35579 1960 aaKnown RBP14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 FAM187AA6NFU0 413 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 H0YHG0 523 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 PSMC5P62195 406 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 CETN1Q12798 172 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 DHX34Q14147 1143 aaKnown RBP14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 TREML2Q5T2D2 321 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 SEL1L2Q5TEA6 688 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 ICE2Q659A1 982 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 PASD1Q8IV76 773 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 ZNF516Q92618 1163 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 FAM213AQ9BRX8 229 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 HEMGNQ9BXL5 484 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 CYP39A1Q9NYL5 469 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 R3HDM2Q9Y2K5 976 aaKnown RBP14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 SYNGAP1Q96PV0 1343 aa14.44□□□□□ -0.1
GTF2F1-201ENST00000394456 ACSL3O95573 720 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 HADHBP55084 474 aaKnown RBP14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 KRT76Q01546 638 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 LRRC14Q15048 493 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 LONRF1Q17RB8 773 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 SUPT20HL1Q3ZLR7 823 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 ANKS1BQ7Z6G8 1248 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 SAMD3Q8N6K7 520 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 PSPC1Q8WXF1 523 aaKnown RBP14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 ACAD9Q9H845 621 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 AAASQ9NRG9 546 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 SNCAIPQ9Y6H5 919 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 PTPRJQ12913 1337 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 A6NNZ2 444 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 CYP1A2P05177 515 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 IBSPP21815 317 aaPredicted RBP14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 CHRNA3P32297 505 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 JAK3P52333 1124 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 TUBB8Q3ZCM7 444 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 MMS22LQ6ZRQ5 1243 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 CYFIP1Q7L576 1253 aa14.43□□□□□ -0.1
GTF2F1-201ENST00000394456 TAS1R3Q7RTX0 852 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms