RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 DYNC1LI2O43237 492 aaPredicted RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 HLA-DRAP01903 254 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 PHKA2P46019 1235 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 ELF2Q15723 593 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 ERCC6LQ2NKX8 1250 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 ATF7IP2Q5U623 682 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 TLK2Q86UE8 772 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 TATDN2Q93075 761 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 A0A087WZ62 844 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 CA12O43570 354 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 BUB1O43683 1085 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 TMOD1P28289 359 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 EEF1DP3Q658K8 133 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 ZBTB33Q86T24 672 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 KAT2BQ92831 832 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 AGPAT1Q99943 283 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 TCHPQ9BT92 498 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.13■□□□□ 0.175e-12■■■■■ 42.4
CCT4-201ENST00000394440 NOCTQ9UK39 431 aaKnown RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 SAR1BQ9Y6B6 198 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 ENOSF1Q7L5Y1 443 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 PALB2Q86YC2 1186 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 OR5B17Q8NGF7 314 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 U2AF1L4Q8WU68 220 aaKnown RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 SLC20A1Q8WUM9 679 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 LENG1Q96BZ8 264 aaPredicted RBP16.13■□□□□ 0.17
CCT4-201ENST00000394440 FAM81BQ96LP2 452 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 PI4K2AQ9BTU6 479 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 AKT3Q9Y243 479 aa16.13■□□□□ 0.17
CCT4-201ENST00000394440 VTNP04004 478 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 DNAAF5Q86Y56 855 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 WDR49Q8IV35 697 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 CDT1Q9H211 546 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 ABT1Q9ULW3 272 aaKnown RBP16.12■□□□□ 0.17
CCT4-201ENST00000394440 Q9Y3F1 56 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 A0A0A6YYK5 440 aaPredicted RBP16.12■□□□□ 0.17
CCT4-201ENST00000394440 AP3M2P53677 418 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 KIAA0319LQ8IZA0 1049 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 C1orf112Q9NSG2 853 aa16.12■□□□□ 0.17
CCT4-201ENST00000394440 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 PRLRP16471 622 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 TNFAIP3P21580 790 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 PIK3CAP42336 1068 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 SNX12Q9UMY4 172 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 CITO14578 2027 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 HAS3O00219 553 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 TULP1O00294 542 aaPredicted RBP16.11■□□□□ 0.17
CCT4-201ENST00000394440 CYP26A1O43174 497 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 SGPL1O95470 568 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 CHRNB2P17787 502 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 GALCP54803 685 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
CCT4-201ENST00000394440 BIRC3Q13489 604 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 SURF1Q15526 300 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
CCT4-201ENST00000394440 CEP120Q8N960 986 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 UBXN4Q92575 508 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
CCT4-201ENST00000394440 MAP7D2Q96T17 732 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 SETD4Q9NVD3 440 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 NCANO14594 1321 aa16.11■□□□□ 0.17
CCT4-201ENST00000394440 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
CCT4-201ENST00000394440 GRID2IPA4D2P6 1211 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 ZEB2O60315 1214 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 TMEM253P0C7T8 217 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 CHMP4BP1P59074 171 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 ZNF410Q86VK4 478 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
CCT4-201ENST00000394440 TAS2R14Q9NYV8 317 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 GPR25O00155 361 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 SRGAP2O75044 1071 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 PALMO75781 387 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 SMIM10L2AP0DMW4 78 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 SMIM10L2BP0DMW5 78 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 ADAM17P78536 824 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 SLC47A2Q86VL8 602 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 CDR2LQ86X02 465 aaPredicted RBP16.1■□□□□ 0.17
CCT4-201ENST00000394440 PPP1R16BQ96T49 567 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 ARID3AQ99856 593 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
CCT4-201ENST00000394440 PDZD7Q9H5P4 517 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms