RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TCP11X1B4DZS4 312 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 H0YGN5 161 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 ICAM1P05362 532 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 KRT15P19012 456 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 VCAM1P19320 739 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 OSTNP61366 133 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 CLUL1Q15846 466 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 LIN9Q5TKA1 542 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 TTLL6Q8N841 843 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 DEPTORQ8TB45 409 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 FIZ1Q96SL8 496 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 IMPG2Q9BZV3 1241 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
ACTN1-203ENST00000394419 SLC40A1Q9NP59 571 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 NFS1Q9Y697 457 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 GOLGA8SH3BPF8 625 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 GOLGA8MH3BSY2 632 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 TMED2Q15363 201 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-203ENST00000394419 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
ACTN1-203ENST00000394419 CD19P15391 556 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 ZNF131P52739 623 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 MRPS9P82933 396 aaKnown RBP11.26□□□□□ -0.61
ACTN1-203ENST00000394419 FMO1Q01740 532 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 SNRNP48Q6IEG0 339 aaKnown RBP11.26□□□□□ -0.61
ACTN1-203ENST00000394419 SCARA5Q6ZMJ2 495 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 CCDC63Q8NA47 563 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 RUNDC3BQ96NL0 473 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 SYNCQ9H7C4 482 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 FGFR1OP2Q9NVK5 253 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 NCANO14594 1321 aa11.26□□□□□ -0.61
ACTN1-203ENST00000394419 RALAP11233 206 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 BRAFP15056 766 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 RFX1P22670 979 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 ITGA8P53708 1063 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 ALCAMQ13740 583 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 SNCBQ16143 134 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 SLC15A2Q16348 729 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 TACO1Q9BSH4 297 aaKnown RBP11.25□□□□□ -0.61
ACTN1-203ENST00000394419 CDC42EP4Q9H3Q1 356 aaKnown RBP11.25□□□□□ -0.61
ACTN1-203ENST00000394419 SLC12A6Q9UHW9 1150 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 PCDHA10Q9Y5I2 948 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 MAST2Q6P0Q8 1798 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 PPFIA2O75334 1257 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 MAP2K2P36507 400 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 MMP14P50281 582 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 CDR2Q01850 454 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 ATP6V0A1Q93050 837 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 UBE4BO95155 1302 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 TMEM120BA0PK00 339 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 K7ERI5 159 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 SPAG7O75391 227 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 KRT10P13645 584 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 CREB1P16220 341 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 GBP2P32456 591 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-203ENST00000394419 CCDC91Q7Z6B0 441 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 AKT1S1Q96B36 256 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 POLR3FQ9H1D9 316 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-203ENST00000394419 TMEM8AQ9HCN3 771 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
ACTN1-203ENST00000394419 RIPK2O43353 540 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 NR3C2P08235 984 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 KRT19P08727 400 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 DNM1LO00429 736 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 CHRNB2P17787 502 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 MARK3P27448 753 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 SCTRP47872 440 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 KRT76Q01546 638 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 ACAD10Q6JQN1 1059 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 GPD1LQ8N335 351 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 MRIQ9BWK5 157 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
ACTN1-203ENST00000394419 COL5A3P25940 1745 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 ASTN2O75129 1339 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-203ENST00000394419 WDR91A4D1P6 747 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 CHKAP35790 457 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 HMGCS2P54868 508 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 STYK1Q6J9G0 422 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 C11orf63Q6NUN7 778 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 FAM71AQ8IYT1 594 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 KIF2BQ8N4N8 673 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms