RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 TIE1P35590 1138 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 OR1G1P47890 313 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 NUCB2P80303 420 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 AMPD3Q01432 767 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 MCL1Q07820 350 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 KYAT1Q16773 422 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 PLPP4Q5VZY2 271 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 CNNM4Q6P4Q7 775 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 ADGRD2Q7Z7M1 963 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 TMEM173Q86WV6 379 aaPredicted RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 EFHBQ8N7U6 833 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 BCL7CQ8WUZ0 217 aaPredicted RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 DHX58Q96C10 678 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 BICD1Q96G01 975 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 ZBTB45Q96K62 511 aaPredicted RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 ASB2Q96Q27 587 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 COLEC11Q9BWP8 271 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 SCAND2PQ9GZW5 306 aaPredicted RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 ZBP1Q9H171 429 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 TLE6Q9H808 572 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 OLFML3Q9NRN5 406 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 TOPORSQ9NS56 1045 aaPredicted RBP9.36□□□□□ -0.91
APLF-202ENST00000394342 MARCH5Q9NX47 278 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 ANKFY1Q9P2R3 1169 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 GDAQ9Y2T3 454 aa9.36□□□□□ -0.91
APLF-202ENST00000394342 CTSAP10619 480 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 CMA1P23946 247 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 NMT1P30419 496 aaKnown RBP9.35□□□□□ -0.91
APLF-202ENST00000394342 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
APLF-202ENST00000394342 NRIP1P48552 1158 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 LIG4P49917 911 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 TFF2Q03403 129 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ADAM15Q13444 863 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 TUSC3Q13454 348 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ALCAMQ13740 583 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 NAB2Q15742 525 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 DUSP6Q16828 381 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 LEXMQ3ZCV2 418 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 XKR4Q5GH76 650 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ADALQ6DHV7 355 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ALKAL1Q6UXT8 129 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ZNF720Q7Z2F6 126 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 TMC7Q7Z402 723 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 CCDC65Q8IXS2 484 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 VPS52Q8N1B4 723 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 SNX27Q96L92 541 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 ACAP3Q96P50 834 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 PPP1R10Q96QC0 940 aaKnown RBP9.35□□□□□ -0.91
APLF-202ENST00000394342 NOTCH4Q99466 2003 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 C7orf25Q9BPX7 421 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 HERC2P3Q9BVR0 1158 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 STRA6Q9BX79 667 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 IGFLR1Q9H665 355 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 MRPL44Q9H9J2 332 aaKnown RBP9.35□□□□□ -0.91
APLF-202ENST00000394342 PANK4Q9NVE7 773 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 CLDND1Q9NY35 253 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 KCNH3Q9ULD8 1083 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 PRG3Q9Y2Y8 225 aaPredicted RBP9.35□□□□□ -0.91
APLF-202ENST00000394342 PCDHGC5Q9Y5F6 944 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 IRAK3Q9Y616 596 aa9.35□□□□□ -0.91
APLF-202ENST00000394342 C2orf71A6NGG8 1288 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 HIDE1A8MVS5 230 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 OGTO15294 1046 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 CXCL14O95715 111 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 EFEMP2O95967 443 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 SOD2P04179 222 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 CLTAP09496 248 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 SRGAP2BP0DMP2 458 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 IDEP14735 1019 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 KCNE1P15382 129 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 KCNA5P22460 613 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 GTF2F1P35269 517 aaKnown RBP eCLIP9.34□□□□□ -0.91
APLF-202ENST00000394342 LTBRP36941 435 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 OSTNP61366 133 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 HERC4Q5GLZ8 1057 aaPredicted RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 SLFN12LQ6IEE8 588 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 RNF168Q8IYW5 571 aaPredicted RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 CEP57L1Q8IYX8 460 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 CEP120Q8N960 986 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
APLF-202ENST00000394342 UROC1Q96N76 676 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 TRIM9Q9C026 710 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 HAPLN2Q9GZV7 340 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 CXCL16Q9H2A7 254 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 SLC38A7Q9NVC3 462 aa9.34□□□□□ -0.91
APLF-202ENST00000394342 CNTN3Q9P232 1028 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms