RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GUCY2DQ02846 1103 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 TMEM130Q8N3G9 435 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 BBXQ8WY36 941 aaPredicted RBP16.21■□□□□ 0.19
GPC3-202ENST00000394299 IFT81Q8WYA0 676 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 PBKQ96KB5 322 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 MROH8Q9H579 483 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 TMEM59LQ9UK28 342 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 NOC2LQ9Y3T9 749 aaKnown RBP16.21■□□□□ 0.19
GPC3-202ENST00000394299 ALG6Q9Y672 507 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 ADGRA2Q96PE1 1338 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CNTNAP2Q9UHC6 1331 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 MSCO60682 206 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 LGR5O75473 907 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 HEXIM1O94992 359 aaKnown RBP16.21■□□□□ 0.19
GPC3-202ENST00000394299 PIGRP01833 764 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 COPB2P35606 906 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 PIK3CAP42336 1068 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CLCN3P51790 818 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 GPC5P78333 572 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CLDN10P78369 228 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 LLGL2Q6P1M3 1020 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.196e-69■■■■□ 22
GPC3-202ENST00000394299 USP37Q86T82 979 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 FMNL3Q8IVF7 1028 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 SYCE1Q8N0S2 351 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 ATP8B4Q8TF62 1192 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 AENQ8WTP8 325 aaKnown RBP16.21■□□□□ 0.19
GPC3-202ENST00000394299 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.19
GPC3-202ENST00000394299 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 CLDN3O15551 220 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
GPC3-202ENST00000394299 MCM3P25205 808 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 MARCKSL1P49006 195 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 OSTNP61366 133 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 CDR2Q01850 454 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 MESDQ14696 234 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 ALG3Q92685 438 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 KRT35Q92764 455 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 TMEM134Q9H6X4 195 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 KIAA1586Q9HCI6 787 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 HPCAL4Q9UM19 191 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 ATP8B3O60423 1300 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 B4GALT5O43286 388 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 FAM153BP0C7A2 387 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 PDE6CP51160 858 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 FAM153CQ494X1 144 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 ACTRT1Q8TDG2 376 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 VTI1AQ96AJ9 217 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 C1orf112Q9NSG2 853 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 NFU1Q9UMS0 254 aa16.2■□□□□ 0.18
GPC3-202ENST00000394299 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
GPC3-202ENST00000394299 ADORA2AP29274 412 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 FAM193AP78312 1265 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 IER5Q5VY09 327 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 GPRC5AQ8NFJ5 357 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 CPA5Q8WXQ8 436 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
GPC3-202ENST00000394299 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.19■□□□□ 0.18
GPC3-202ENST00000394299 CCDC113Q9H0I3 377 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 MINDY3Q9H8M7 445 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 KCNG1Q9UIX4 513 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 NUB1Q9Y5A7 615 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
GPC3-202ENST00000394299 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
GPC3-202ENST00000394299 KRIT1O00522 736 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 FGGP02679 453 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 GCNT1Q02742 428 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 GABPB1Q06547 395 aaPredicted RBP16.19■□□□□ 0.18
GPC3-202ENST00000394299 WDR44Q5JSH3 913 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 EFCAB12Q6NXP0 572 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 PLPPR4Q7Z2D5 763 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 CEP120Q8N960 986 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 BRI3BPQ8WY22 251 aa16.19■□□□□ 0.18
GPC3-202ENST00000394299 ACO2Q99798 780 aaKnown RBP16.19■□□□□ 0.18
GPC3-202ENST00000394299 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 CCL15-CCL14A0A0B4J2E2 113 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.18■□□□□ 0.18
GPC3-202ENST00000394299 PGRMC1O00264 195 aaKnown RBP16.18■□□□□ 0.18
GPC3-202ENST00000394299 FAM189A1O60320 539 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 PRKCBP05771 671 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 IQCF3P0C7M6 154 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 GZMAP12544 262 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 TTLL4Q14679 1199 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 CCL15Q16663 113 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 MAMDC4Q6UXC1 1216 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■■□□ 16.4
GPC3-202ENST00000394299 DDX42Q86XP3 938 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms