RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 LARGE2Q8N3Y3 721 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 ZNF398Q8TD17 642 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 MAML1Q92585 1016 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 KIAA1683Q9H0B3 1180 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 SENP1Q9P0U3 644 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 ANAPC5Q9UJX4 755 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 PCDHA1Q9Y5I3 950 aa24.28■■□□□ 1.48
RARA-202ENST00000394081 TRIM49P0CI25 452 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 TRIM49CP0CI26 452 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 SPARCL1Q14515 664 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 C1orf186Q6ZWK4 172 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 ZNF720Q7Z2F6 126 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 NBPF5PQ86XG9 351 aaPredicted RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 TDRPQ86YL5 185 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 DENND1AQ8TEH3 1009 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 TMEM174Q8WUU8 243 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 TEKT4Q8WW24 435 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 TUFT1Q9NNX1 390 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 HAO1Q9UJM8 370 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 SMG5Q9UPR3 1016 aaKnown RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 MEIS2O14770 477 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 GSTA2P09210 222 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 T-ENOLP0DO92 83 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 TARSP26639 723 aaKnown RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 PTPN4P29074 926 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 NMT1P30419 496 aaKnown RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 TMEM63BQ5T3F8 832 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 SETDB2Q96T68 719 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 POP1Q99575 1024 aaKnown RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 EIF2AK1Q9BQI3 630 aaKnown RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 NUP85Q9BW27 656 aa24.27■■□□□ 1.48
RARA-202ENST00000394081 UBE2TQ9NPD8 197 aaPredicted RBP24.27■■□□□ 1.48
RARA-202ENST00000394081 RASA4BC9J798 803 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 RASA4O43374 803 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 GNAT1P11488 350 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 SREBF1P36956 1147 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 PDCD2Q16342 344 aaPredicted RBP24.26■■□□□ 1.47
RARA-202ENST00000394081 PDK4Q16654 411 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 QRICH1Q2TAL8 776 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 SLC45A4Q5BKX6 768 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 TPTE2Q6XPS3 522 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 DHX37Q8IY37 1157 aaKnown RBP24.26■■□□□ 1.47
RARA-202ENST00000394081 FAM136AQ96C01 138 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 UIMC1Q96RL1 719 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 FIZ1Q96SL8 496 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 KCND2Q9NZV8 630 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 EDF1O60869 148 aaKnown RBP24.26■■□□□ 1.47
RARA-202ENST00000394081 DLATP10515 647 aaKnown RBP24.26■■□□□ 1.47
RARA-202ENST00000394081 CENPCQ03188 943 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 MTHFD1LQ6UB35 978 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 ATL2Q8NHH9 583 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 NOCTQ9UK39 431 aaKnown RBP24.26■■□□□ 1.47
RARA-202ENST00000394081 LRCH1Q9Y2L9 728 aa24.26■■□□□ 1.47
RARA-202ENST00000394081 PMM2O15305 246 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 CLDN3O15551 220 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 CETPP11597 493 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 MARK3P27448 753 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 SLC16A2P36021 539 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 FAM47EQ6ZV65 393 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 TRAPPC9Q96Q05 1148 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 SYT15Q9BQS2 421 aa24.25■■□□□ 1.47
RARA-202ENST00000394081 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.25■■□□□ 1.47
RARA-202ENST00000394081 GREB1LQ9C091 1923 aaPredicted RBP24.25■■□□□ 1.47
RARA-202ENST00000394081 VHLP40337 213 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 CYP2J2P51589 502 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 RNASELQ05823 741 aaKnown RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 TRABD2AQ86V40 505 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 SLC17A8Q8NDX2 589 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 EPS8L1Q8TE68 723 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 C10orf82Q8WW14 230 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 C1orf54Q8WWF1 131 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 PCDHB18PQ96TA0 734 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 TUBB6Q9BUF5 446 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 PPCSQ9HAB8 311 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 ZNF536O15090 1300 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 A0A1W2PRG0 241 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 EXOC3O60645 756 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 RTN3O95197 1032 aaPredicted RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 IL1R1P14778 569 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 CHRNB2P17787 502 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 SP100P23497 879 aaPredicted RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 EIF6P56537 245 aaKnown RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 OCRLQ01968 901 aa24.24■■□□□ 1.47
RARA-202ENST00000394081 ZC2HC1CQ53FD0 456 aaPredicted RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 DENND2DQ9H6A0 471 aaPredicted RBP24.24■■□□□ 1.47
RARA-202ENST00000394081 NVLO15381 856 aaKnown RBP24.23■■□□□ 1.47
RARA-202ENST00000394081 TOM1O60784 492 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 HSPA1LP34931 641 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 COG2Q14746 738 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 ZRSR2Q15696 482 aaKnown RBP24.23■■□□□ 1.47
RARA-202ENST00000394081 MUM1Q2TAK8 710 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 EPC2Q52LR7 807 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 TMEM154Q6P9G4 183 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 FAM178BQ8IXR5 827 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 FAM71AQ8IYT1 594 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 CCDC89Q8N998 374 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 DCLK3Q9C098 648 aa24.23■■□□□ 1.47
RARA-202ENST00000394081 TBK1Q9UHD2 729 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms