RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 SNF8Q96H20 258 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 DYDC2Q96IM9 177 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 LRRC19Q9H756 370 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 VAV3Q9UKW4 847 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 CYP26A1O43174 497 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 UFL1O94874 794 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 T-ENOLP0DO92 83 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 SKIV2L2P42285 1042 aaKnown RBP17.53■□□□□ 0.4
CNP-201ENST00000393888 PPP3CAQ08209 521 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 MKRN3Q13064 507 aaKnown RBP17.53■□□□□ 0.4
CNP-201ENST00000393888 GPATCH4Q5T3I0 446 aaKnown RBP17.53■□□□□ 0.4
CNP-201ENST00000393888 FAM178BQ8IXR5 827 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 TSC22D3Q99576 134 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 HEMGNQ9BXL5 484 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 LRMDAQ9H2I8 198 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 PARVGQ9HBI0 331 aa17.53■□□□□ 0.4
CNP-201ENST00000393888 ITIH2P19823 946 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 ZNF76P36508 570 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 IL9RQ01113 521 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 TMEM154Q6P9G4 183 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 CAPN12Q6ZSI9 719 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 ZNF720Q7Z2F6 126 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 SLC7A6OSQ96CW6 309 aaPredicted RBP17.52■□□□□ 0.4
CNP-201ENST00000393888 GRID1Q9ULK0 1009 aa17.52■□□□□ 0.4
CNP-201ENST00000393888 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
CNP-201ENST00000393888 GSTTP1A0A1W2PQM5 241 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 ACVR2BQ13705 512 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 ODR4Q5SWX8 454 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 C1orf186Q6ZWK4 172 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 TEX9Q8N6V9 391 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 FIZ1Q96SL8 496 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 MOV10L1Q9BXT6 1211 aaKnown RBP17.52■□□□□ 0.39
CNP-201ENST00000393888 DENND2DQ9H6A0 471 aaPredicted RBP17.52■□□□□ 0.39
CNP-201ENST00000393888 DAGLAQ9Y4D2 1042 aa17.52■□□□□ 0.39
CNP-201ENST00000393888 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 EIF3DO15371 548 aaKnown RBP eCLIP17.51■□□□□ 0.39
CNP-201ENST00000393888 SNUPNO95149 360 aaKnown RBP17.51■□□□□ 0.39
CNP-201ENST00000393888 GAP43P17677 238 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 ATP6V1C1P21283 382 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 CCDC15Q0P6D6 951 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 PARP6Q2NL67 630 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 TBC1D10BQ4KMP7 808 aaPredicted RBP17.51■□□□□ 0.39
CNP-201ENST00000393888 SLC30A9Q6PML9 568 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 C4orf33Q8N1A6 199 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 PSPC1Q8WXF1 523 aaKnown RBP17.51■□□□□ 0.39
CNP-201ENST00000393888 CRYGNQ8WXF5 182 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 NEFHP12036 1026 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 ATF2P15336 505 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 RRM1P23921 792 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 SHMT1P34896 483 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 RFWD3Q6PCD5 774 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 LMNTD2Q8IXW0 634 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
CNP-201ENST00000393888 C12orf50Q8NA57 414 aaPredicted RBP17.51■□□□□ 0.39
CNP-201ENST00000393888 EPS8L1Q8TE68 723 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 UCMAQ8WVF2 138 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 DMAC2Q9NW81 257 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 MYH11P35749 1972 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 PLIN4Q96Q06 1357 aa17.51■□□□□ 0.39
CNP-201ENST00000393888 FAM47DPA6NHR8 397 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 POC1B-GALNT4F8VUJ3 575 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 MAPK13O15264 365 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 SLITRK3O94933 977 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 RFC5P40937 340 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 Q4G0T1 1027 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 RNF220Q5VTB9 566 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 ZCWPW1Q9H0M4 648 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 PAPOLBQ9NRJ5 636 aaKnown RBP17.5■□□□□ 0.39
CNP-201ENST00000393888 USH1CQ9Y6N9 552 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 CDH16O75309 829 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 PAPOLAP51003 745 aaKnown RBP17.5■□□□□ 0.39
CNP-201ENST00000393888 UBXN2AP68543 259 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
CNP-201ENST00000393888 C2CD6Q53TS8 623 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 LLGL2Q6P1M3 1020 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 PPP1R21Q6ZMI0 780 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 PPM1KQ8N3J5 372 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 ASAP3Q8TDY4 903 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 TEKT4Q8WW24 435 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 GRAMD1AQ96CP6 724 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 DLGAP2Q9P1A6 1054 aa17.5■□□□□ 0.39
CNP-201ENST00000393888 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.5■□□□□ 0.39
CNP-201ENST00000393888 FSCN2O14926 492 aa17.49■□□□□ 0.39
CNP-201ENST00000393888 SLC26A4O43511 780 aa17.49■□□□□ 0.39
CNP-201ENST00000393888 FESP07332 822 aa17.49■□□□□ 0.39
CNP-201ENST00000393888 PECAM1P16284 738 aaPredicted RBP17.49■□□□□ 0.39
CNP-201ENST00000393888 GRAPQ13588 217 aa17.49■□□□□ 0.39
CNP-201ENST00000393888 MUM1Q2TAK8 710 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms