RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FOXN3O00409 490 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 ZNF263O14978 683 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 KRT86O43790 486 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 EVI5O60447 810 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 LCA5LO95447 670 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 FGFR4P22455 802 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 PROZP22891 400 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 VAV2P52735 878 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 MFAP3P55082 362 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 HIC1Q14526 733 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CXCL17Q6UXB2 119 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ZNF571Q7Z3V5 609 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 FMNL3Q8IVF7 1028 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 BRSK2Q8IWQ3 736 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 PRIMPOLQ96LW4 560 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 WDR24Q96S15 920 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 GCOM2Q9BZD3 368 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 CDT1Q9H211 546 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 PTPRHQ9HD43 1115 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 LUC7LQ9NQ29 371 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 XPNPEP3Q9NQH7 507 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ADAMTS1Q9UHI8 967 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 PTPRJQ12913 1337 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CNTNAP2Q9UHC6 1331 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 A0A087X0T9 212 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 MBLAC1A4D2B0 266 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 GPR25O00155 361 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ABLIM1O14639 778 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 HLA-DRAP01903 254 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 C4BPAP04003 597 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 FAM228BP0C875 321 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ARF4P18085 180 aaPredicted RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 PRKCIP41743 596 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CLDN10P78369 228 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 SURF1Q15526 300 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 AMHR2Q16671 573 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
TDP1-203ENST00000393454 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 TXLNBQ8N3L3 684 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CEP120Q8N960 986 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 OR5B17Q8NGF7 314 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 KAT5Q92993 513 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 TATDN2Q93075 761 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 OSMRQ99650 979 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 TSGA10Q9BZW7 698 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 GPR88Q9GZN0 384 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 ADAMTS10Q9H324 1103 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 PDZD7Q9H5P4 517 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 C1orf112Q9NSG2 853 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 CASP8AP2Q9UKL3 1982 aa9.33□□□□□ -0.92
TDP1-203ENST00000393454 MACROD2A1Z1Q3 448 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 FAM189A1O60320 539 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 TSPAN1O60635 241 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 GPR32O75388 356 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 STAG3L1P0CL83 205 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 MCF2P10911 925 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 AP3M2P53677 418 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 TFAMQ00059 246 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 ZACNQ401N2 412 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 C15orf39Q6ZRI6 1047 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 SLC35F6Q8N357 371 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 ADPGKQ9BRR6 497 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 UPF3AQ9H1J1 476 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 CDHR5Q9HBB8 845 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 SEPT11Q9NVA2 429 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
TDP1-203ENST00000393454 HMGCRP04035 888 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 TMEM191BP0C7N4 346 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 CXCL8P10145 99 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 NAP1L1P55209 391 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 ADAM17P78536 824 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 DUOXA2Q1HG44 320 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 WDR49Q8IV35 697 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 TMEM192Q8IY95 271 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 U2AF1L4Q8WU68 220 aaKnown RBP9.32□□□□□ -0.92
TDP1-203ENST00000393454 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 DUSP10Q9Y6W6 482 aa9.32□□□□□ -0.92
TDP1-203ENST00000393454 RBAK-RBAKDNI3L0D1 243 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 IL18RAPO95256 599 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 VNN1O95497 513 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 TNNC2P02585 160 aa9.31□□□□□ -0.92
TDP1-203ENST00000393454 CLTAP09496 248 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms