RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CLASP2O75122 1294 aaKnown RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 PIGRP01833 764 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 URODP06132 367 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 IL9P15248 144 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 CA8P35219 290 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 LIG4P49917 911 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 OSTNP61366 133 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 SHC4Q6S5L8 630 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 PPP1R10Q96QC0 940 aaKnown RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 CASTOR2A6NHX0 329 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 TNFRSF10AO00220 468 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 MBTPS2O43462 519 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 TADA2AO75478 443 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 HARSP12081 509 aaKnown RBP12.94□□□□□ -0.34
RFC4-202ENST00000392481 KCNE1P15382 129 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 HOXB8P17481 243 aaPredicted RBP12.94□□□□□ -0.34
RFC4-202ENST00000392481 NMT1P30419 496 aaKnown RBP12.94□□□□□ -0.34
RFC4-202ENST00000392481 GLUD2P49448 558 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 SMAD2Q15796 467 aaKnown RBP12.94□□□□□ -0.34
RFC4-202ENST00000392481 E2F4Q16254 413 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 TAS1R1Q7RTX1 841 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 SFR1Q86XK3 245 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 CASP10Q92851 521 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 SNX27Q96L92 541 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 PAAF1Q9BRP4 392 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 TNMDQ9H2S6 317 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 CHST7Q9NS84 486 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 HCFC2Q9Y5Z7 792 aa12.94□□□□□ -0.34
RFC4-202ENST00000392481 SF3B1O75533 1304 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■■ 54
RFC4-202ENST00000392481 FRMD3A2A2Y4 597 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 CLTAP09496 248 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 CNPP09543 421 aaKnown RBP12.93□□□□□ -0.34
RFC4-202ENST00000392481 IDEP14735 1019 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 MATR3P43243 847 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFC4-202ENST00000392481 AMPD3Q01432 767 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 DSG1Q02413 1049 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 KYAT1Q16773 422 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 ZC2HC1CQ53FD0 456 aaPredicted RBP12.93□□□□□ -0.34
RFC4-202ENST00000392481 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 KIAA0319Q5VV43 1072 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 KIAA1841Q6NSI8 718 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 LLGL2Q6P1M3 1020 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 DHX58Q96C10 678 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 UROC1Q96N76 676 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 STRA6Q9BX79 667 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 MRPL44Q9H9J2 332 aaKnown RBP12.93□□□□□ -0.34
RFC4-202ENST00000392481 PLEKHA5Q9HAU0 1116 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 FAM13BQ9NYF5 915 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 CNTN3Q9P232 1028 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
RFC4-202ENST00000392481 A0A0B4J269 797 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 OGTO15294 1046 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 PPP1R37O75864 691 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 KIF4AO95239 1232 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 KRT85P78386 507 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 ELAVL2Q12926 359 aaKnown RBP12.92□□□□□ -0.34
RFC4-202ENST00000392481 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 TPRNQ4KMQ1 711 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 HERC4Q5GLZ8 1057 aaPredicted RBP12.92□□□□□ -0.34
RFC4-202ENST00000392481 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 DCLRE1AQ6PJP8 1040 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 SLC22A17Q8WUG5 538 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
RFC4-202ENST00000392481 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
RFC4-202ENST00000392481 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
RFC4-202ENST00000392481 KLHL5Q96PQ7 755 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 MAGEF1Q9HAY2 307 aa12.92□□□□□ -0.34
RFC4-202ENST00000392481 RXFP1Q9HBX9 757 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms