RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 CLUL1Q15846 466 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 E2F4Q16254 413 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZNF568Q3ZCX4 644 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 CCDC73Q6ZRK6 1079 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 MYCT1Q8N699 235 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZMAT2Q96NC0 199 aaKnown RBP12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 KLHL5Q96PQ7 755 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 TBX20Q9UMR3 447 aa12.48□□□□□ -0.41
IGHV4-28-201ENST00000390612 SCN1AP35498 2009 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 FRMD3A2A2Y4 597 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 CUTAO60888 179 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 PAPLNO95428 1278 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 C1RP00736 705 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ADRB2P07550 413 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 NMT1P30419 496 aaKnown RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 TXLNAP40222 546 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 FOXD4L5Q5VV16 416 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 FUT10Q6P4F1 479 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SLC39A4Q6P5W5 647 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZNF720Q7Z2F6 126 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ZBTB33Q86T24 672 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ADHFE1Q8IWW8 467 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 FOXD4L4Q8WXT5 416 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 RABGGTAQ92696 567 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 DDX12PQ92771 950 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 CASP10Q92851 521 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SNX27Q96L92 541 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 MRPL17Q9NRX2 175 aaKnown RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 CNTN3Q9P232 1028 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SEL1LQ9UBV2 794 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 USP15Q9Y4E8 981 aaPredicted RBP12.47□□□□□ -0.41
IGHV4-28-201ENST00000390612 TECTAO75443 2155 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 A0A0B4J269 797 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 CASTOR2A6NHX0 329 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 CLDN3O15551 220 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 TBCAO75347 108 aaKnown RBP12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 KIF4AO95239 1232 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 KRT18P05783 430 aaKnown RBP12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 EPCAMP16422 314 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 ABCD1P33897 745 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 GLUD2P49448 558 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 SOX4Q06945 474 aaPredicted RBP12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 USP41Q3LFD5 358 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 MAP4K3Q8IVH8 894 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 GJD3Q8N144 294 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 TCHPQ9BT92 498 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 FNIP2Q9P278 1114 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
IGHV4-28-201ENST00000390612 NOTCH4Q99466 2003 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 K7ENM7 598 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 TEX28O15482 410 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 TADA2AO75478 443 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 URODP06132 367 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 CLTAP09496 248 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 SRGAP2BP0DMP2 458 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 GAP43P17677 238 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 STAT6P42226 847 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 CLCN4P51793 760 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 OSTNP61366 133 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 CBX2Q14781 532 aaPredicted RBP12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZBTB6Q15916 424 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 UPP1Q16831 310 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZC2HC1CQ53FD0 456 aaPredicted RBP12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 DCLRE1AQ6PJP8 1040 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 DYMQ7RTS9 669 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 HVCN1Q96D96 273 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 UROC1Q96N76 676 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 EMILIN2Q9BXX0 1053 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 ADAM7Q9H2U9 754 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms