RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 KCNA10Q16322 511 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 TDRD10Q5VZ19 366 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 HAUS4Q9H6D7 363 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 CPSF3Q9UKF6 684 aaKnown RBP13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
SPTBN1-203ENST00000389980 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 F8VZ95 297 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 PMM2O15305 246 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 AKR1B10O60218 316 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 ERLIN2O94905 339 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 GTF2H1P32780 548 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 CLDN10P78369 228 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 BIRC3Q13489 604 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 FAM47CQ5HY64 1035 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 C15orf39Q6ZRI6 1047 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 TMEM130Q8N3G9 435 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 TATDN2Q93075 761 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 EIF3CLB5ME19 914 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 KPNA6O60684 536 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 VNN1O95497 513 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 CXCL8P10145 99 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 HOXC8P31273 242 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 PTK2Q05397 1052 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 ASTE1Q2TB18 679 aaPredicted RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 ZACNQ401N2 412 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 THSD7BQ9C0I4 1608 aa13.18□□□□□ -0.3
SPTBN1-203ENST00000389980 FANCGO15287 622 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 INHAP05111 366 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 SOX5P35711 763 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 STAT1P42224 750 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 ZNF571Q7Z3V5 609 aaPredicted RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 WNT8BQ93098 351 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 KREMEN1Q96MU8 473 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 CITO14578 2027 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 FAM170AA1A519 330 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 MEFVO15553 781 aaPredicted RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 EVI5O60447 810 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 ENPEPQ07075 957 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 KIAA1328Q86T90 577 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 MTMR12Q9C0I1 747 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 ADAMTS1Q9UHI8 967 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
SPTBN1-203ENST00000389980 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 SSU72P8A0A1W2PR75 194 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 GNAT1P11488 350 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 USP8P40818 1118 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 NKX3-2P78367 333 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 SPA17Q15506 151 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 HELQQ8TDG4 1101 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 PXYLP1Q8TE99 480 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 WDR24Q96S15 920 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 ARID3AQ99856 593 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 DNAI1Q9UI46 699 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 GRIN2DO15399 1336 aa13.16□□□□□ -0.3
SPTBN1-203ENST00000389980 A0A087X0T9 212 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms