RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 FOXP3Q9BZS1 431 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 NACA2Q9H009 215 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 TMBIM4Q9HC24 238 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 NUB1Q9Y5A7 615 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 PJA2O43164 708 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 MUTP22033 750 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 ITKQ08881 620 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 P3H1Q32P28 736 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 MMEL1Q495T6 779 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 CREG2Q8IUH2 290 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 GTPBP10A4D1E9 387 aaKnown RBP17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 CA8P35219 290 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 ARFIP2P53365 341 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 KYNUQ16719 465 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 C3orf20Q8ND61 904 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 OSBPL8Q9BZF1 889 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 FAM129AQ9BZQ8 928 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 STOML1Q9UBI4 398 aa17.1■□□□□ 0.33
PTPRN2-201ENST00000389413 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 EFNA5P52803 228 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 GABPAQ06546 454 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 SGSM3Q96HU1 749 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 M0QYV0 167 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 PHKA2P46019 1235 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 FNTAP49354 379 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 SIX6OS1Q8N1H7 587 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 EHD4Q9H223 541 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 CHORDC1Q9UHD1 332 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 GGT7Q9UJ14 662 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 RGL2O15211 777 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 KLRC4O43908 158 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 LPXNO60711 386 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 GSTA1P08263 222 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 GSTA2P09210 222 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 CHRNA5P30532 468 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 TRPM8Q7Z2W7 1104 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 TMEM120BA0PK00 339 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 CCT8L1PA6NM43 557 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 NR3C2P08235 984 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 SDC4P31431 198 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 SH2D4BQ5SQS7 431 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 ARMCX2Q7L311 632 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 AENQ8WTP8 325 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 TRAF3IP3Q9Y228 551 aa17.09■□□□□ 0.33
PTPRN2-201ENST00000389413 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 NCF2P19878 526 aaPredicted RBP17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 RXRBP28702 533 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 CNGA1P29973 690 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 CDR2Q01850 454 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 ROR1Q01973 937 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 MDM1Q8TC05 714 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 ANKEF1Q9NU02 776 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 KLHL11Q9NVR0 708 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 SLIT3O75094 1523 aa17.08■□□□□ 0.33
PTPRN2-201ENST00000389413 F8VZ95 297 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 BCAR1P56945 870 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 KRT3P12035 628 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 ZNF677Q86XU0 584 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 CIITAP33076 1130 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 ITGA8P53708 1063 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 GMCL1Q96IK5 515 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM47DPA6NHR8 397 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 HLA-DRAP01903 254 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 MTMR2Q13614 643 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 NCOA4Q13772 614 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 IL17AQ16552 155 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 FAM102AQ5T9C2 384 aaPredicted RBP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 ZNF720Q7Z2F6 126 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 TMEM139Q8IV31 216 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 MTMR9Q96QG7 549 aa17.07■□□□□ 0.32
PTPRN2-201ENST00000389413 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms