RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 CLTAP09496 248 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 KRT5P13647 590 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 MUTP22033 750 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 CNGA1P29973 690 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 BAATQ14032 418 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 ANO5Q75V66 913 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 MYCBPAPQ8TBZ2 947 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 A1CFQ9NQ94 594 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 NOCTQ9UK39 431 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
RAPGEF3-201ENST00000389212 RTN2O75298 545 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLCO1A2P46721 670 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 POLE2P56282 527 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 GTF2BQ00403 316 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 FMO1Q01740 532 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 NEK9Q8TD19 979 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 TCP11Q8WWU5 503 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 PGAP2Q9UHJ9 254 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 TBX20Q9UMR3 447 aa12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 COL2A1P02458 1487 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-201ENST00000389212 ANKRD33BA6NCL7 494 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 FGFR4P22455 802 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 SLC39A4Q6P5W5 647 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 RHOT2Q8IXI1 618 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZNF564Q8TBZ8 553 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 POMGNT1Q8WZA1 660 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 DBR1Q9UK59 544 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 COQ9O75208 318 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 GNAT1P11488 350 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 CA8P35219 290 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 QPCTQ16769 361 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 LRIG3Q6UXM1 1119 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 CEP170P1Q96L14 293 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 RAB17Q9H0T7 212 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 KMT5AQ9NQR1 393 aa12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZNF862O60290 1169 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PLA2G6O60733 806 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 CYP11B1P15538 503 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 SLC8A1P32418 973 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PSMC5P62195 406 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 BICD1Q96G01 975 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 FAM118BQ9BPY3 351 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 TBC1D12O60347 775 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PEX10O60683 326 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 TRIP13Q15645 432 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC137Q6PK04 289 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC105Q8IYK2 499 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 C1orf54Q8WWF1 131 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 FAM213AQ9BRX8 229 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 EPB41L4BQ9H329 900 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 SEMA4AQ9H3S1 761 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
RAPGEF3-201ENST00000389212 PFASO15067 1338 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 WDR64B1ANS9 1081 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SWSAP1Q6NVH7 229 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 HIBCHQ6NVY1 386 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 DRAXINQ8NBI3 349 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SEC14L1Q92503 715 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms