RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MYL6P60660 151 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CCNA1P78396 465 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 OLFML2BQ68BL8 750 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 DPH6Q7L8W6 267 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 C12orf56Q8IXR9 622 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CEP112Q8N8E3 955 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 AFAP1L1Q8TED9 768 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 NT5C1BQ96P26 610 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 TIPINQ9BVW5 301 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 NXF1Q9UBU9 619 aaKnown RBP10.94□□□□□ -0.66
LTN1-203ENST00000389195 TRIP12Q14669 1992 aaPredicted RBP10.94□□□□□ -0.66
LTN1-203ENST00000389195 LOXHD1Q8IVV2 1947 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CNTNAP2Q9UHC6 1331 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 FMO1Q01740 532 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 MAPK6Q16659 721 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 CC2D1AQ6P1N0 951 aaPredicted RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 SPATA4Q8NEY3 305 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 IQCDQ96DY2 449 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 ACO2Q99798 780 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 ERAP1Q9NZ08 941 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 MGAMO43451 1857 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 ASB14A6NK59 587 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 CEP104O60308 925 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 N4BP1O75113 896 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 C22orf31O95567 290 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 TRIM32Q13049 653 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 MESDQ14696 234 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 WHAMMP3Q1A5X7 153 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 ZNF568Q3ZCX4 644 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 EFCAB13Q8IY85 973 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 OR6J1Q8NGC5 347 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 KRT35Q92764 455 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 CTTNBP2NLQ9P2B4 639 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 NOCTQ9UK39 431 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 POLIQ9UNA4 740 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 ADGRA2Q96PE1 1338 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 PIK3R2O00459 728 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 RRP9O43818 475 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 FAM189A1O60320 539 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 LGR5O75473 907 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 GARTP22102 1010 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 PDE4CQ08493 712 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
LTN1-203ENST00000389195 MEI1Q5TIA1 1274 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 TMCO3Q6UWJ1 677 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 FAM71AQ8IYT1 594 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 KIAA0319LQ8IZA0 1049 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 LRRC57Q8N9N7 239 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 CYFIP2Q96F07 1278 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 APOL6Q9BWW8 343 aa10.93□□□□□ -0.66
LTN1-203ENST00000389195 PLXNA1Q9UIW2 1896 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 SCN4AP35499 1836 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 KAT6AQ92794 2004 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 O00370 1275 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 POLR3GO15318 223 aaPredicted RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 GRB14Q14449 540 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 KIF22Q14807 665 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 ZACNQ401N2 412 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 GLRA4Q5JXX5 417 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 ATF7IP2Q5U623 682 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 PEX26Q7Z412 305 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 KRT12Q99456 494 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 CCDC113Q9H0I3 377 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 CACNG4Q9UBN1 327 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 FBXL5Q9UKA1 691 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 MYADML2A6NDP7 307 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 GH1P01241 217 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 NFICP08651 508 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 RFC5P40937 340 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 GPC3P51654 580 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 MFAP3P55082 362 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 RTP1P59025 263 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 NCOA4Q13772 614 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 LONRF2Q1L5Z9 754 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 DCAF12L1Q5VU92 463 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 IER5Q5VY09 327 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 ZNF662Q6ZS27 426 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 ANKRD23Q86SG2 305 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 RASAL3Q86YV0 1011 aa10.92□□□□□ -0.66
LTN1-203ENST00000389195 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
LTN1-203ENST00000389195 SHC3Q92529 594 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms