RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 EXOC1LA0A1B0GW35 172 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 STK10O94804 968 aaKnown RBP20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PYGMP11217 842 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 CD151P48509 253 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 TMEM259Q4ZIN3 620 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 DNAJC14Q6Y2X3 702 aaPredicted RBP20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 PHF12Q96QT6 1004 aa20.19■□□□□ 0.82
SMARCD1-201ENST00000381513 C2CD2LO14523 706 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 ZBED4O75132 1171 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 GAS8O95995 478 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 CHRNB2P17787 502 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 RPA3P35244 121 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 GJA8P48165 433 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 HP1BP3Q5SSJ5 553 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 BTBD7Q9P203 1132 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 ANAPC5Q9UJX4 755 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 COG5Q9UP83 839 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 TRAF3IP3Q9Y228 551 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 NUMBLQ9Y6R0 609 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 TNRQ92752 1358 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 AP2B1P63010 937 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 PLOD1Q02809 727 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 CCDC92Q53HC0 331 aaPredicted RBP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 RNF207Q6ZRF8 634 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 PKD1L3Q7Z443 1732 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 SLIT3O75094 1523 aa20.18■□□□□ 0.82
SMARCD1-201ENST00000381513 SPDYE16A6NNV3 312 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 M0R2N6 131 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 RGS2P41220 211 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 PDK4Q16654 411 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 ARHGAP44Q17R89 818 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 RFWD2Q8NHY2 731 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 TUBGCP4Q9UGJ1 667 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 BARX2Q9UMQ3 279 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 PCDHB13Q9Y5F0 798 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 LTN1O94822 1766 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 BOLA2-SMG1P6H3BVE0 249 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 CTNNA2P26232 953 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 GRIA2P42262 883 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 SGO2Q562F6 1265 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 PLEKHG4Q58EX7 1191 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 RBM44Q6ZP01 1051 aaKnown RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 C7orf43Q8WVR3 580 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 AKAP11Q9UKA4 1901 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 NCCRP1Q6ZVX7 275 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 PRR11Q96HE9 360 aaPredicted RBP20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 PCDH18Q9HCL0 1135 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 BARHL2Q9NY43 387 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 ARMCX1Q9P291 453 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 GRID1Q9ULK0 1009 aa20.17■□□□□ 0.82
SMARCD1-201ENST00000381513 ZNF24P17028 368 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 COMTP21964 271 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 SLC1A5Q15758 541 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 MDH1BQ5I0G3 518 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 LVRNQ6Q4G3 990 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 SLC13A5Q86YT5 568 aaPredicted RBP20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 SCFD1Q8WVM8 642 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 GJA10Q969M2 543 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 ZSWIM1Q9BR11 485 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 POTEFA5A3E0 1075 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 MIF4GDA9UHW6 222 aaKnown RBP20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 B2RBV5 119 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 H3BRJ5 948 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 ATF2P15336 505 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 MLH1P40692 756 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 C1orf146Q5VVC0 180 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 ZNF75CPQ92670 426 aaPredicted RBP20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 ANKFY1Q9P2R3 1169 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 STX8Q9UNK0 236 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 WDR37Q9Y2I8 494 aa20.16■□□□□ 0.82
SMARCD1-201ENST00000381513 SMIM31A0A1B0GVY4 71 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 TMEM221A6NGB7 291 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 E2F6O75461 281 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 CYP2D6P10635 497 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 ARFIP2P53365 341 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 TMEM63BQ5T3F8 832 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 LRRC8BQ6P9F7 803 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 PALB2Q86YC2 1186 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 ATG4AQ8WYN0 398 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 DGCR14Q96DF8 476 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 CLPTM1LQ96KA5 538 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 MKNK1Q9BUB5 465 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 TUBB6Q9BUF5 446 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 MAGEB2O15479 319 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 LRRN2O75325 713 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 SH3D19Q5HYK7 790 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 GRAMD4Q6IC98 578 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 B3GNT6Q6ZMB0 384 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms