RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.57□□□□□ -0.24
PUDP-201ENST00000381077 SH2D3CQ8N5H7 860 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PSPC1Q8WXF1 523 aaKnown RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 BSNDQ8WZ55 320 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 KAT5Q92993 513 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 MAGOHBQ96A72 148 aaKnown RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 CCDC127Q96BQ5 260 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SAAL1Q96ER3 474 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PGM2Q96G03 612 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 CELF4Q9BZC1 486 aaKnown RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 HOMER3Q9NSC5 361 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SLC12A6Q9UHW9 1150 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 RIPK3Q9Y572 518 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 MAFBQ9Y5Q3 323 aaPredicted RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 SSC5DA1L4H1 1573 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 MYO1FO00160 1098 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 NFKBIEO00221 500 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 FSCN2O14926 492 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 RGS20O76081 388 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 FAM107AO95990 144 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 CPP00450 1065 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 PPP2R2AP63151 447 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 STRN3Q13033 797 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 PDCLQ13371 301 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 BYSLQ13895 437 aaKnown RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 NIFKQ9BYG3 293 aaKnown RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 STMN4Q9H169 189 aaPredicted RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 TMOD4Q9NZQ9 345 aa13.56□□□□□ -0.24
PUDP-201ENST00000381077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
PUDP-201ENST00000381077 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
PUDP-201ENST00000381077 TMEM150BA6NC51 233 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 RFC5P40937 340 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 CCT5P48643 541 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 GMPSP49915 693 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 LIG4P49917 911 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 PMS2P54278 862 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 GRM1Q13255 1194 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 PTPROQ16827 1216 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 CCDC137Q6PK04 289 aaKnown RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 KRT35Q92764 455 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 TLCD1Q96CP7 247 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 POLR3FQ9H1D9 316 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 PORCNQ9H237 461 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 ERVK-5Q9HDB9 667 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 CNOT8Q9UFF9 292 aaKnown RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 ADGRA3Q8IWK6 1321 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 COILP38432 576 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 CENPCQ03188 943 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 TMEM132BQ14DG7 1078 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 STXBP2Q15833 593 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 ZDHHC24Q6UX98 284 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
PUDP-201ENST00000381077 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 GRK7Q8WTQ7 553 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 BICD1Q96G01 975 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 TRIM51Q9BSJ1 452 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 DPH5Q9H2P9 285 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 WHRNQ9P202 907 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
PUDP-201ENST00000381077 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 C4BPAP04003 597 aaKnown RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 OATP04181 439 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 RARGP13631 454 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 CAV1Q03135 178 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 IFFO1Q0D2I5 559 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 EMC2Q15006 297 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 SIX1Q15475 284 aaPredicted RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 DENND2CQ68D51 928 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 MCOLN2Q8IZK6 566 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
PUDP-201ENST00000381077 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
PUDP-201ENST00000381077 EGFRP00533 1210 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms