RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 VMP1Q96GC9 406 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 NEUROG2Q9H2A3 272 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ZBTB40Q9NUA8 1239 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TRIM33Q9UPN9 1127 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 GH2P01242 217 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 KRT17Q04695 432 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 CYFIP1Q7L576 1253 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 GSPT2Q8IYD1 628 aaKnown RBP11.36□□□□□ -0.59
CLCN4-202ENST00000380833 ZNF555Q8NEP9 628 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 AGR3Q8TD06 166 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 TMEM245Q9H330 911 aa11.36□□□□□ -0.59
CLCN4-202ENST00000380833 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ATP13A5Q4VNC0 1218 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 NEK10Q6ZWH5 1172 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PHF21AQ96BD5 680 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 SOWAHDA6NJG2 315 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ECEL1O95672 775 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 HSPA6P17066 643 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 MAGEA8P43361 318 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 KIF2BQ8N4N8 673 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ACCSQ96QU6 501 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 FSD1LQ9BXM9 530 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 CASS4Q9NQ75 786 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 FAM153AQ9UHL3 310 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 GSPT1P15170 499 aaKnown RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PHKG2P15735 406 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 CDH3P22223 829 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 IL10P22301 178 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PPARGP37231 505 aaPredicted RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 CENPAP49450 140 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 MXI1P50539 228 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 STOML2Q9UJZ1 356 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PEG3Q9GZU2 1588 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ZBTB39O15060 712 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 CLK1P49759 484 aaKnown RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PSMC6P62333 389 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 ACAP2Q15057 778 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 IMPG1Q17R60 797 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 URGCPQ8TCY9 931 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 MTERF3Q96E29 417 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 CHID1Q9BWS9 393 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 IARS2Q9NSE4 1012 aaKnown RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 NEO1Q92859 1461 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 IQANK1A0A1B0GTG1 560 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 KLHL33A6NCF5 533 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PRAMEP78395 509 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 BBS9Q3SYG4 887 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 BBS2Q9BXC9 721 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 NSMCE4AQ9NXX6 385 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 GCNT4Q9P109 453 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 KIF17Q9P2E2 1029 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 LRCH1Q9Y2L9 728 aa11.35□□□□□ -0.59
CLCN4-202ENST00000380833 RAPGEF6Q8TEU7 1601 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 PYGLP06737 847 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 PSAPP07602 524 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 ATP5JP18859 108 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 RFC5P40937 340 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 POU5F1BQ06416 359 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
CLCN4-202ENST00000380833 P3H1Q32P28 736 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 PRMT1Q99873 361 aaKnown RBP11.34□□□□□ -0.59
CLCN4-202ENST00000380833 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 ELP3Q9H9T3 547 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 DYRK4Q9NR20 520 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 RBBP7Q16576 425 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 EME1Q96AY2 570 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 DFFAO00273 331 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 BTN3A3O00478 584 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 CALB1P05937 261 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 NDUFA8P51970 172 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 DR1Q01658 176 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 ITIH4Q14624 930 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 EGFL8Q99944 293 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 SPATA2Q9UM82 520 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 ORC4O43929 436 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 IFNA8P32881 189 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 LRIG3Q6UXM1 1119 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 RALGAPBQ86X10 1494 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 SNX2O60749 519 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms