RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ZNF568Q3ZCX4 644 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 WDR44Q5JSH3 913 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 WDR49Q8IV35 697 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 CEP112Q8N8E3 955 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 U2AF1L4Q8WU68 220 aaKnown RBP23.17■■□□□ 1.3
GMDS-202ENST00000380815 AGPAT1Q99943 283 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.17■■□□□ 1.36e-7■■■■■ 109.9
GMDS-202ENST00000380815 C1orf112Q9NSG2 853 aa23.17■■□□□ 1.3
GMDS-202ENST00000380815 NRCAMQ92823 1304 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 ALDH1A1P00352 501 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 VTNP04004 478 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 H2AFZP0C0S5 128 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 TNFAIP3P21580 790 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 H2AFVQ71UI9 128 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 KIAA0319LQ8IZA0 1049 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 ANKRD7Q92527 254 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 KAT2BQ92831 832 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 TATDN2Q93075 761 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 FAM84AQ96KN4 292 aa23.16■■□□□ 1.3
GMDS-202ENST00000380815 VNN1O95497 513 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 PIK3CAP42336 1068 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 AMHR2Q16671 573 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 TMEM132AQ24JP5 1023 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 SRGAP1Q7Z6B7 1085 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 ZNF410Q86VK4 478 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 LMBR1Q8WVP7 490 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 PI4K2AQ9BTU6 479 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 AP5M1Q9H0R1 490 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 SETD4Q9NVD3 440 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 HDAC6Q9UBN7 1215 aa23.15■■□□□ 1.3
GMDS-202ENST00000380815 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-202ENST00000380815 V9GYY5 206 aaPredicted RBP23.15■■□□□ 1.3
GMDS-202ENST00000380815 BUB1O43683 1085 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 USP8P40818 1118 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 NAP1L1P55209 391 aaKnown RBP23.14■■□□□ 1.3
GMDS-202ENST00000380815 FCGRTP55899 365 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 EEF1DP3Q658K8 133 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 NFRKBQ6P4R8 1299 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 OR5B17Q8NGF7 314 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 UBXN4Q92575 508 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 LENG1Q96BZ8 264 aaPredicted RBP23.14■■□□□ 1.3
GMDS-202ENST00000380815 PCDHGC5Q9Y5F6 944 aa23.14■■□□□ 1.3
GMDS-202ENST00000380815 A0A0A6YYK5 440 aaPredicted RBP23.14■■□□□ 1.29
GMDS-202ENST00000380815 SMIM10L2AP0DMW4 78 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 SMIM10L2BP0DMW5 78 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 CDC42EP1Q00587 391 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 ERCC6LQ2NKX8 1250 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 ZNF710Q8N1W2 664 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 EPS8L1Q8TE68 723 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 NLRP7Q8WX94 980 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 CDT1Q9H211 546 aa23.14■■□□□ 1.29
GMDS-202ENST00000380815 KAT6AQ92794 2004 aa23.13■■□□□ 1.29
GMDS-202ENST00000380815 CYP26A1O43174 497 aa23.13■■□□□ 1.29
GMDS-202ENST00000380815 PRLRP16471 622 aa23.13■■□□□ 1.29
GMDS-202ENST00000380815 MFSD10Q14728 455 aa23.13■■□□□ 1.29
GMDS-202ENST00000380815 IFI16Q16666 785 aaKnown RBP23.13■■□□□ 1.29
GMDS-202ENST00000380815 SLC20A1Q8WUM9 679 aa23.13■■□□□ 1.29
GMDS-202ENST00000380815 NOCTQ9UK39 431 aaKnown RBP23.13■■□□□ 1.29
GMDS-202ENST00000380815 MBLAC1A4D2B0 266 aaPredicted RBP23.12■■□□□ 1.29
GMDS-202ENST00000380815 HAS3O00219 553 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 MCF2P10911 925 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 AKR1A1P14550 325 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 POU5F1Q01860 360 aaKnown RBP23.12■■□□□ 1.29
GMDS-202ENST00000380815 ELF2Q15723 593 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 CYP4F22Q6NT55 531 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 PAXIP1Q6ZW49 1069 aaPredicted RBP23.12■■□□□ 1.29
GMDS-202ENST00000380815 THNSL1Q8IYQ7 743 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 PPP1R16BQ96T49 567 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 MGAMO43451 1857 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 PHACTR2O75167 634 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 SGPL1O95470 568 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 PSMC4P43686 418 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 GALCP54803 685 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 NCOA4Q13772 614 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 DUOXA2Q1HG44 320 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 RSRC2Q7L4I2 434 aaKnown RBP23.12■■□□□ 1.29
GMDS-202ENST00000380815 NOP9Q86U38 636 aaKnown RBP23.12■■□□□ 1.29
GMDS-202ENST00000380815 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 SCLT1Q96NL6 688 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 SNX12Q9UMY4 172 aa23.12■■□□□ 1.29
GMDS-202ENST00000380815 SMIM35A0A1B0GVV1 85 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 B4GALT4O60513 344 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 CSDE1O75534 798 aaKnown RBP23.11■■□□□ 1.29
GMDS-202ENST00000380815 PALMO75781 387 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 TMEM253P0C7T8 217 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 CYP11B1P15538 503 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 PSEN2P49810 448 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 CHMP4BP1P59074 171 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 TUBB4BP68371 445 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 LACTBP83111 547 aaPredicted RBP23.11■■□□□ 1.29
GMDS-202ENST00000380815 NOGQ13253 232 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 CDR2LQ86X02 465 aaPredicted RBP23.11■■□□□ 1.29
GMDS-202ENST00000380815 RPUSD2Q8IZ73 545 aaKnown RBP23.11■■□□□ 1.29
GMDS-202ENST00000380815 PDZD7Q9H5P4 517 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 SEPT11Q9NVA2 429 aaKnown RBP23.11■■□□□ 1.29
GMDS-202ENST00000380815 TSKSQ9UJT2 592 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 MYH10P35580 1976 aa23.11■■□□□ 1.29
GMDS-202ENST00000380815 GPR25O00155 361 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 IL18RAPO95256 599 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 ARF4P18085 180 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms