RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CCL15Q16663 113 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 PAXIP1Q6ZW49 1069 aaPredicted RBP20.72■□□□□ 0.91
GMDS-201ENST00000380805 DDX1Q92499 740 aaKnown RBP20.72■□□□□ 0.91
GMDS-201ENST00000380805 HHIPL1Q96JK4 782 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 PCDHB18PQ96TA0 734 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 KATNBL1Q9H079 304 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 THAP2Q9H0W7 228 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 PDGFCQ9NRA1 345 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 C1orf112Q9NSG2 853 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 EHD2Q9NZN4 543 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 PTPRJQ12913 1337 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 ABLIM1O14639 778 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 HSPA6P17066 643 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 ADORA2AP29274 412 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 ACOT2P49753 483 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 LAMC2Q13753 1193 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 MAP9Q49MG5 647 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 TDRD10Q5VZ19 366 aaKnown RBP20.71■□□□□ 0.91
GMDS-201ENST00000380805 MAMDC4Q6UXC1 1216 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 HDXQ7Z353 690 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 PEX26Q7Z412 305 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 SLC47A2Q86VL8 602 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 BRSK2Q8IWQ3 736 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 RASGEF1CQ8N431 466 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
GMDS-201ENST00000380805 COPS5Q92905 334 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 TATDN2Q93075 761 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 ARHGEF26Q96DR7 871 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 MS4A14Q96JA4 679 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 PDE11AQ9HCR9 933 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 OSGEPQ9NPF4 335 aa20.71■□□□□ 0.91
GMDS-201ENST00000380805 RBM12Q9NTZ6 932 aaKnown RBP20.71■□□□□ 0.91
GMDS-201ENST00000380805 BUB1BO60566 1050 aaPredicted RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 SLC10A3P09131 477 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 MARK3P27448 753 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 TNFRSF8P28908 595 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 AP3M2P53677 418 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ZBTB8OSQ8IWT0 167 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 USP38Q8NB14 1042 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 NFKBIZQ9BYH8 718 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ERAP1Q9NZ08 941 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 SMARCAL1Q9NZC9 954 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ANK1P16157 1881 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 TMCO5BA8MYB1 307 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 VNN1O95497 513 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 HLA-DRAP01903 254 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 FTLP02792 175 aaPredicted RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 TNNI1P19237 187 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ABCB4P21439 1286 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 PROZP22891 400 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 PDE6CP51160 858 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 MCL1Q07820 350 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ZBTB41Q5SVQ8 909 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 TMEM63BQ5T3F8 832 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 C11orf63Q6NUN7 778 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 CCNI2Q6ZMN8 369 aaPredicted RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 DAAM2Q86T65 1068 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 ACO2Q99798 780 aaKnown RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 LRRC1Q9BTT6 524 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 GOLPH3Q9H4A6 298 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 SEPT11Q9NVA2 429 aaKnown RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 ANKFY1Q9P2R3 1169 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 TTC7AQ9ULT0 858 aaPredicted RBP20.7■□□□□ 0.9
GMDS-201ENST00000380805 COG5Q9UP83 839 aa20.7■□□□□ 0.9
GMDS-201ENST00000380805 KCNK3O14649 394 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 CLDN3O15551 220 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 ASAP2O43150 1006 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 GPC5P78333 572 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 POU5F1BQ06416 359 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 MAPK6Q16659 721 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 ZNF484Q5JVG2 852 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 ZNF677Q86XU0 584 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 METTL13Q8N6R0 699 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 FZD8Q9H461 694 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 AMFRQ9UKV5 643 aa20.69■□□□□ 0.9
GMDS-201ENST00000380805 TTLL13PA6NNM8 815 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 C22orf31O95567 290 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 GH1P01241 217 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 PRKCBP05771 671 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 USP8P40818 1118 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 TFDP1Q14186 410 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 GRB14Q14449 540 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 WDR44Q5JSH3 913 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 TSHZ1Q6ZSZ6 1077 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 LINC01465Q8N7H1 131 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 RNF149Q8NC42 400 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 PPTC7Q8NI37 304 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 CCDC102AQ96A19 550 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 SELENOOQ9BVL4 669 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 VIPAS39Q9H9C1 493 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 PTPRHQ9HD43 1115 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 STIM2Q9P246 746 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 CNTN6Q9UQ52 1028 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 COL1A2P08123 1366 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 EVPLQ92817 2033 aa20.68■□□□□ 0.9
GMDS-201ENST00000380805 OGTO15294 1046 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 MMEP08473 750 aa20.67■□□□□ 0.9
GMDS-201ENST00000380805 PIK3CAP42336 1068 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms