RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TNS2Q63HR2 1409 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 HAUS5O94927 633 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 RPL5P46777 297 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CDR2Q01850 454 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 BTKQ06187 659 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 HLFQ16534 295 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 PPP1R21Q6ZMI0 780 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 RHOT2Q8IXI1 618 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 BRSK1Q8TDC3 778 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 SLC26A6Q9BXS9 759 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TBC1D23Q9NUY8 699 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PFDN6O15212 129 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 DAPK3O43293 454 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 GUCY1B2O75343 617 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PTPN2P17706 415 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ENTPD1P49961 510 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 RAB15P59190 212 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CD300CQ08708 224 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ACAP1Q15027 740 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 LILRB1Q8NHL6 650 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 EEF2KMTQ96G04 330 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 MED30Q96HR3 178 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CDHR1Q96JP9 859 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PRICKLE1Q96MT3 831 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 RTFDC1Q9BY42 306 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CUEDC2Q9H467 287 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 SIAEQ9HAT2 523 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 DENND2AQ9ULE3 1009 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 KCNJ14Q9UNX9 436 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 TRAF3IP3Q9Y228 551 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 MCF2LO15068 1137 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 BUB1O43683 1085 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 FUCA1P04066 466 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 FYNP06241 537 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 NOP14P78316 857 aaKnown RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ITPK1Q13572 414 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 SF3B4Q15427 424 aaKnown RBP eCLIP9.93□□□□□ -0.822e-7■■■■■ 28.8
PTPRA-204ENST00000380393 PHKG1Q16816 387 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 USP49Q70CQ1 688 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 BRSK2Q8IWQ3 736 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ALDH16A1Q8IZ83 802 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PGM2Q96G03 612 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 RSPH9Q9H1X1 276 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 KDM3BQ7LBC6 1761 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 A0A088AWK7 358 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 FARP2O94887 1054 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PTPN4P29074 926 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ADCY8P40145 1251 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 STT3AP46977 705 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 WTAPQ15007 396 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 KCNJ8Q15842 424 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 TMEM266Q2M3C6 531 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 NADK2Q4G0N4 442 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 TBC1D10BQ4KMP7 808 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 ANKRD42Q8N9B4 389 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 EGLN2Q96KS0 407 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CEP63Q96MT8 703 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 GPBP1L1Q9HC44 474 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-204ENST00000380393 UVRAGQ9P2Y5 699 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 STK39Q9UEW8 545 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 CAPN11Q9UMQ6 739 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 DMTF1Q9Y222 760 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 PCDHA13Q9Y5I0 950 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 NR2E3Q9Y5X4 410 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 MAD1L1Q9Y6D9 718 aa9.93□□□□□ -0.82
PTPRA-204ENST00000380393 KCNJ18B7U540 433 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 SEC24DO94855 1032 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZBTB11O95625 1053 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 CLPTM1O96005 669 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 SLC5A2P31639 672 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ATICP31939 592 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 IFNA8P32881 189 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 SLCO1A2P46721 670 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 CDC16Q13042 620 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 KCNJ12Q14500 433 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 LRP10Q7Z4F1 713 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 CLVS1Q8IUQ0 354 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 KSR1Q8IVT5 923 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 REM2Q8IYK8 340 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZFP28Q8NHY6 868 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 EME1Q96AY2 570 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 PSKH2Q96QS6 385 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 NDFIP2Q9NV92 336 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-204ENST00000380393 BTBD18B2RXH4 712 aa9.92□□□□□ -0.82
PTPRA-204ENST00000380393 DDX3XO00571 662 aaKnown RBP eCLIP9.92□□□□□ -0.826e-26■■■■■ 54.6
PTPRA-204ENST00000380393 ZNF263O14978 683 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms