RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 NAMPTP43490 491 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 ZNF174Q15697 407 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 POLR3CQ9BUI4 534 aaPredicted RBP25.48■■□□□ 1.67
U2AF1-202ENST00000380276 KIFC3Q9BVG8 833 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 ZFP37Q9Y6Q3 630 aaPredicted RBP25.48■■□□□ 1.67
U2AF1-202ENST00000380276 CFAP54Q96N23 3096 aa25.48■■□□□ 1.67
U2AF1-202ENST00000380276 PAPLNO95428 1278 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 NEFLP07196 543 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 OR52Z1P0C646 297 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 PPP2R5AQ15172 486 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 GLRA4Q5JXX5 417 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 EEF1DP3Q658K8 133 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 PDXDC1Q6P996 788 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 PARM1Q6UWI2 310 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 SLC7A14Q8TBB6 771 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 IFT74Q96LB3 600 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 POLD4Q9HCU8 107 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 CDH7Q9ULB5 785 aa25.47■■□□□ 1.67
U2AF1-202ENST00000380276 ACKR2O00590 384 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 ADAM12O43184 909 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 CYP11B2P19099 503 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 ID4P47928 161 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 PHLDB3Q6NSJ2 640 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 FGF14Q92915 247 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 HINFPQ9BQA5 517 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 RPP25Q9BUL9 199 aaKnown RBP25.46■■□□□ 1.67
U2AF1-202ENST00000380276 FOXQ1Q9C009 403 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 SLC2A4RGQ9NR83 387 aa25.46■■□□□ 1.67
U2AF1-202ENST00000380276 RPA1P27694 616 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 OR1D2P34982 312 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 GPC5P78333 572 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 FOXK2Q01167 660 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 GNL2Q13823 731 aaKnown RBP25.45■■□□□ 1.66
U2AF1-202ENST00000380276 DCAF4L1Q3SXM0 396 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 AXDND1Q5T1B0 1012 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-202ENST00000380276 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-202ENST00000380276 MTSS1LQ765P7 747 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 C8orf76Q96K31 380 aa25.45■■□□□ 1.66
U2AF1-202ENST00000380276 B3GAT3O94766 335 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 LMNAP02545 664 aaKnown RBP25.44■■□□□ 1.66
U2AF1-202ENST00000380276 EDN1P05305 212 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 CCT6AP40227 531 aaKnown RBP25.44■■□□□ 1.66
U2AF1-202ENST00000380276 HAUS3Q68CZ6 603 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 ITFG1Q8TB96 612 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 FGF13Q92913 245 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 SHDQ96IW2 340 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 CCDC113Q9H0I3 377 aa25.44■■□□□ 1.66
U2AF1-202ENST00000380276 MYH15Q9Y2K3 1946 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 HOXA9P31269 272 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 SNW1Q13573 536 aaKnown RBP25.43■■□□□ 1.66
U2AF1-202ENST00000380276 NAB2Q15742 525 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 ATF7IP2Q5U623 682 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 APBB1IPQ7Z5R6 666 aaPredicted RBP25.43■■□□□ 1.66
U2AF1-202ENST00000380276 PJA1Q8NG27 643 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 HCFC1R1Q9NWW0 138 aa25.43■■□□□ 1.66
U2AF1-202ENST00000380276 PTPRZ1P23471 2315 aaPredicted RBP25.42■■□□□ 1.66
U2AF1-202ENST00000380276 LRRN2O75325 713 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 CLCNKBP51801 687 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 ZC3H14Q6PJT7 736 aaKnown RBP25.42■■□□□ 1.66
U2AF1-202ENST00000380276 C1orf210Q8IVY1 113 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 CCDC83Q8IWF9 413 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 ING5Q8WYH8 240 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 KXD1Q9BQD3 176 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 BHMT2Q9H2M3 363 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 SEMA4AQ9H3S1 761 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 GOLGA2P5Q9HBQ8 144 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 CDY1Q9Y6F8 540 aa25.42■■□□□ 1.66
U2AF1-202ENST00000380276 VWA8A3KMH1 1905 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 I3L4J1 428 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 EFNA5P52803 228 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 ST3GAL1Q11201 340 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 RAB33AQ14088 237 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 UBXN2BQ14CS0 331 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 PABPC1LQ4VXU2 614 aaKnown RBP25.41■■□□□ 1.66
U2AF1-202ENST00000380276 TTC38Q5R3I4 469 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 MTRRQ9UBK8 725 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 DMDP11532 3685 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 DOCK6Q96HP0 2047 aa25.41■■□□□ 1.66
U2AF1-202ENST00000380276 SP9P0CG40 484 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 FGFR3P22607 806 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 IGFBP6P24592 240 aaPredicted RBP25.4■■□□□ 1.66
U2AF1-202ENST00000380276 TKTP29401 623 aaKnown RBP25.4■■□□□ 1.66
U2AF1-202ENST00000380276 YARSP54577 528 aaKnown RBP25.4■■□□□ 1.66
U2AF1-202ENST00000380276 OSTNP61366 133 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 NT5DC1Q5TFE4 455 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 KIFAP3Q92845 792 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 UROC1Q96N76 676 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 DLGAP2Q9P1A6 1054 aa25.4■■□□□ 1.66
U2AF1-202ENST00000380276 CCDC169A6NNP5 214 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 K7ERI5 159 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 TRAPPC3O43617 180 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 BRCC3P46736 316 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 STARD6P59095 220 aa25.39■■□□□ 1.66
U2AF1-202ENST00000380276 ORC2Q13416 577 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 MLF2Q15773 248 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 PPP1R10Q96QC0 940 aaKnown RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 CCDC94Q9BW85 323 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 SPATA6Q9NWH7 488 aaPredicted RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 DNMT3BQ9UBC3 853 aaKnown RBP25.39■■□□□ 1.66
U2AF1-202ENST00000380276 LRWD1Q9UFC0 647 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms