RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 ARHGAP18Q8N392 663 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SLC38A10Q9HBR0 1119 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 PDXKO00764 312 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SLC16A4O15374 487 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ATMINO43313 823 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ABCD1P33897 745 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ZNF200P98182 395 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CUL3Q13618 768 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 PDIA5Q14554 519 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 EARS2Q5JPH6 523 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SPOPLQ6IQ16 392 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 FBXO25Q8TCJ0 367 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ATP6V0A1Q93050 837 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 RAB6BQ9NRW1 208 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 KCND1Q9NSA2 647 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SUCLA2Q9P2R7 463 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ENO3P13929 434 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TYK2P29597 1187 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ALX1Q15699 326 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SMTNL2Q2TAL5 461 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 FAM84BQ96KN1 310 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TMEM117Q9H0C3 514 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 MAD2L2Q9UI95 211 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CPA2P48052 419 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ACOT2P49753 483 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TROAPQ12815 778 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TRIM67Q6ZTA4 783 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 GTSE1Q9NYZ3 720 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 KLHL8Q9P2G9 620 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SEL1LQ9UBV2 794 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CROCCQ5TZA2 2017 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 IFT172Q9UG01 1749 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 F5H6K3 240 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 KLRC3Q07444 240 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 AP3B2Q13367 1082 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 HEATR6Q6AI08 1181 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 EEPD1Q7L9B9 569 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 RIBC1Q8N443 379 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SPDYE1Q8NFV5 336 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ACTRT1Q8TDG2 376 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 THAP11Q96EK4 314 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SENP7Q9BQF6 1050 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 RBAKQ9NYW8 714 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 AURKCQ9UQB9 309 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 FNDC3AQ9Y2H6 1198 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 DENND3A2RUS2 1198 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SARSP49591 514 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ITGA8P53708 1063 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ORC2Q13416 577 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 JAMLQ86YT9 394 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ACAP3Q96P50 834 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 FSD1LQ9BXM9 530 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 NBPF3Q9H094 633 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 IP6K2Q9UHH9 426 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 COMTP21964 271 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 DSG1Q02413 1049 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 GRM1Q13255 1194 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 PDZD4Q76G19 769 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 BZW1Q7L1Q6 419 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 EDEM3Q9BZQ6 932 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 PALMDQ9NP74 551 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 KRT82Q9NSB4 513 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 PAIP2BQ9ULR5 123 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 NPHP4O75161 1426 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SLC4A1P02730 911 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 ALCAMQ13740 583 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 COL9A3Q14050 684 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 KRT39Q6A163 491 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 SPATA18Q8TC71 538 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CEP19Q96LK0 163 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CDC42EP4Q9H3Q1 356 aaKnown RBP4.43□□□□□ -1.7
BRCA2-201ENST00000380152 TRABDQ9H4I3 376 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 UBE4BO95155 1302 aa4.43□□□□□ -1.7
BRCA2-201ENST00000380152 CNTNAP5Q8WYK1 1306 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 EIF3EP60228 445 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 OR6B2Q6IFH4 312 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KCNB2Q92953 911 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ATP6V1E2Q96A05 226 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NAF1Q96HR8 494 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PSMC3IPQ9P2W1 217 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 PNPLA7Q6ZV29 1317 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 H0YCG3 227 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NEMP1O14524 444 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 MAP2K7O14733 419 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SLC37A4O43826 429 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KDM1AO60341 852 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 BMP6P22004 513 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 SOX11P35716 441 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NKX1-1Q15270 411 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 NTRK3Q16288 839 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 DAB2IPQ5VWQ8 1189 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ACAD11Q709F0 780 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 ARHGEF26Q96DR7 871 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KLF6Q99612 283 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 RPF1Q9H9Y2 349 aaKnown RBP4.42□□□□□ -1.7
BRCA2-201ENST00000380152 LOC100653049A0A140TA62 436 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 AKAP10O43572 662 aa4.42□□□□□ -1.7
BRCA2-201ENST00000380152 KRT34O76011 436 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms