RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 KLC3Q6P597 504 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GJB7Q6PEY0 223 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 POTEEQ6S8J3 1075 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 VGLL2Q8N8G2 317 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 RBM46Q8TBY0 533 aaKnown RBP7.75□□□□□ -1.17
TRIM6-202ENST00000380097 WDR60Q8WVS4 1066 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 NSL1Q96IY1 281 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CCDC28BQ9BUN5 200 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 MKNK2Q9HBH9 465 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CLIC5Q9NZA1 410 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GMEB1Q9Y692 573 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 AFDNP55196 1824 aaKnown RBP7.75□□□□□ -1.17
TRIM6-202ENST00000380097 EXOC1LA0A1B0GW35 172 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
TRIM6-202ENST00000380097 A6NJR5 290 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 ANKRD63C9JTQ0 380 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 C6orf229H3BNL8 230 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GSC2O15499 205 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 SUPT3HO75486 399 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GGPS1O95749 300 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GAS8O95995 478 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 GOLGA8HP0CJ92 632 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 ATF2P15336 505 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 NEK3P51956 506 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 AP2B1P63010 937 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 COG7P83436 770 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 KRT17Q04695 432 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 PPP2R5CQ13362 524 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 MED21Q13503 144 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 SGO2Q562F6 1265 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CAVIN4Q5BKX8 364 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 TTC27Q6P3X3 843 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 TPTE2Q6XPS3 522 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 RASSF3Q86WH2 238 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 RHOT2Q8IXI1 618 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CYP4X1Q8N118 509 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 REXO1Q8N1G1 1221 aaKnown RBP7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CEP70Q8NHQ1 597 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 SH3RF3Q8TEJ3 882 aaPredicted RBP7.75□□□□□ -1.17
TRIM6-202ENST00000380097 NAT14Q8WUY8 206 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 CATSPER2Q96P56 530 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 PNMA5Q96PV4 448 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 THAP2Q9H0W7 228 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 ZNF711Q9Y462 761 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 PCDHB13Q9Y5F0 798 aa7.75□□□□□ -1.17
TRIM6-202ENST00000380097 TRAFD1O14545 582 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CAPN15O75808 1086 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ITGA2BP08514 1039 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ZBTB48P10074 688 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 VCAM1P19320 739 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ITIH2P19823 946 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 RPL13P26373 211 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 STAT4Q14765 748 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ARHGAP44Q17R89 818 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 PPP4R3CPQ6ZMV5 832 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CLNKQ7Z7G1 428 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 C4orf33Q8N1A6 199 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 C9orf72Q96LT7 481 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 TSPAN18Q96SJ8 248 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 LZTS2Q9BRK4 669 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ECM29Q5VYK3 1845 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 MYH7P12883 1935 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 SIGLEC16A6NMB1 481 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 EDF1O60869 148 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 RPS6KA4O75676 772 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ASLP04424 464 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 WDR4P57081 412 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 NR1H3Q13133 447 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CYLC2Q14093 348 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 NFIXQ14938 502 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 LRRC36Q1X8D7 754 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 SLC44A4Q53GD3 710 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 RNF207Q6ZRF8 634 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ADGRA1Q86SQ6 560 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 GPBP1Q86WP2 473 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 DAGLBQ8NCG7 672 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 C1orf54Q8WWF1 131 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 KRT35Q92764 455 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 PPP2R3CQ969Q6 453 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 POP1Q99575 1024 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 TRIM55Q9BYV6 548 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CRNKL1Q9BZJ0 848 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 PDGFDQ9GZP0 370 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 TRABDQ9H4I3 376 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CIDEBQ9UHD4 219 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 SUGT1Q9Y2Z0 365 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 WASF2Q9Y6W5 498 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ANKRD62A6NC57 917 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CALUO43852 315 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CHKAP35790 457 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ITGA8P53708 1063 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ADARP55265 1226 aaKnown RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 CBX3Q13185 183 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 WDR72Q3MJ13 1102 aa7.74□□□□□ -1.17
TRIM6-202ENST00000380097 ZNF772Q68DY9 489 aaPredicted RBP7.74□□□□□ -1.17
TRIM6-202ENST00000380097 FOXR2Q6PJQ5 311 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms