RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 ENTPD7Q9NQZ7 604 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PARVAQ9NVD7 372 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PACSIN2Q9UNF0 486 aaPredicted RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 APOL1O14791 398 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 ATP9BO43861 1147 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 E2F6O75461 281 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 CTCFP49711 727 aaPredicted RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 SLC7A5Q01650 507 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 TMEM132BQ14DG7 1078 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 SV2CQ496J9 727 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PLEKHH3Q7Z736 793 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 TRMT2AQ8IZ69 625 aaKnown RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 CXorf38Q8TB03 319 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 ZKSCAN4Q969J2 545 aaPredicted RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PABPC5Q96DU9 382 aaKnown RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 PCDHGB4Q9UN71 923 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
LINC00654-201ENST00000379053 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 TAP1Q03518 808 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 KCNB1Q14721 858 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 RBBP7Q16576 425 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 ARMC6Q6NXE6 501 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 RHOT1Q8IXI2 618 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 WHAMMQ8TF30 809 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 MED15Q96RN5 788 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 H2AFJQ9BTM1 129 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 ACAD11Q709F0 780 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 TRAIPQ9BWF2 469 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 NEUROG2Q9H2A3 272 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 YME1L1Q96TA2 773 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 COLEC11Q9BWP8 271 aa11.56□□□□□ -0.56
LINC00654-201ENST00000379053 EIF3BP55884 814 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ATF7IP2Q5U623 682 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 C18orf8Q96DM3 657 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 CNOT10Q9H9A5 744 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 HSPBP1Q9NZL4 362 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 PYCARDQ9ULZ3 195 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 KCNA2P16389 499 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 DDX5P17844 614 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 GFPT1Q06210 699 aaPredicted RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ZC3H18Q86VM9 953 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 PCSK9Q8NBP7 692 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 HARS2P49590 506 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 CUL1Q13616 776 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 C6orf118Q5T5N4 469 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 SKA1Q96BD8 255 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 TUBB6Q9BUF5 446 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 CYP4A22Q5TCH4 519 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ATPAF2Q8N5M1 289 aa11.55□□□□□ -0.56
LINC00654-201ENST00000379053 PRMT7Q9NVM4 692 aaPredicted RBP11.55□□□□□ -0.56
LINC00654-201ENST00000379053 ARHGAP10A1A4S6 786 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 GPS1Q13098 491 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ITPK1Q13572 414 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 DMTNQ08495 405 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NR1H3Q13133 447 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ZNF211Q13398 564 aaPredicted RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NCOA4Q13772 614 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 FASTKD1Q53R41 847 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 RRM2BQ7LG56 351 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 SLC30A1Q9Y6M5 507 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NPHP3-ACAD11A0A0J9YXS1 232 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NPTXRO95502 500 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ACTR2P61160 394 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 TWF1Q12792 350 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 IFT88Q13099 833 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 MORF4L2Q15014 288 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 C10orf120Q5SQS8 335 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ERO1BQ86YB8 467 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 PPHLN1Q8NEY8 458 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 USP33Q8TEY7 942 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 XAB2Q9HCS7 855 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 KIF1BO60333 1816 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 CYP26A1O43174 497 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 TRPA1O75762 1119 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 SKIP12755 728 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NLRP11P59045 1033 aaKnown RBP11.54□□□□□ -0.56
LINC00654-201ENST00000379053 SGSM1Q2NKQ1 1148 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 KRT80Q6KB66 452 aa11.54□□□□□ -0.56
LINC00654-201ENST00000379053 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 332.4 ms