RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SF3B1O75533 1304 aaKnown RBP eCLIP20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 TADA2AO75478 443 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 F13A1P00488 732 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 SP100P23497 879 aaPredicted RBP20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 PEX3P56589 373 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 CREMQ03060 361 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 ZRSR1Q15695 479 aaKnown RBP20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 ALKAL1Q6UXT8 129 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 FBXL6Q8N531 539 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 TDRD5Q8NAT2 981 aaKnown RBP20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 RABGGTAQ92696 567 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 B3GALT6Q96L58 329 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 AK8Q96MA6 479 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 PPP1R10Q96QC0 940 aaKnown RBP20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 CACNG4Q9UBN1 327 aa20.78■□□□□ 0.92
TMEM88B-201ENST00000378821 TMEM189-UBE2V1I3L0A0 370 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 SLC26A4O43511 780 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 KIF4AO95239 1232 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 BRD1O95696 1058 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 PDIA4P13667 645 aaKnown RBP20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 PROZP22891 400 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 MARCKSP29966 332 aaPredicted RBP20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 MTMR3Q13615 1198 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 TMEM132AQ24JP5 1023 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 ELMSAN1Q6PJG2 1045 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 APBB1IPQ7Z5R6 666 aaPredicted RBP20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 SYT2Q8N9I0 419 aaPredicted RBP20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 KCNN1Q92952 543 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 NT5C3AQ9H0P0 336 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 KCND2Q9NZV8 630 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 KCNG1Q9UIX4 513 aa20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 FBXO2Q9UK22 296 aaPredicted RBP20.77■□□□□ 0.92
TMEM88B-201ENST00000378821 VWA8A3KMH1 1905 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 CCDC195A0A1B0GUA6 201 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 CASTOR2A6NHX0 329 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 CCDC169A6NNP5 214 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 ABLIM1O14639 778 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 TGM5O43548 720 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 LIG1P18858 919 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 LONP1P36776 959 aaKnown RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 GRM5P41594 1212 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 NASPP49321 788 aaPredicted RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 DMP1Q13316 513 aaPredicted RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 BECN1Q14457 450 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 TMEM119Q4V9L6 283 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 RTP2Q5QGT7 225 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 CCDC149Q6ZUS6 474 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 OTOP3Q7RTS5 596 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 SPIRE2Q8WWL2 714 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 RIN2Q8WYP3 895 aaPredicted RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 PIK3R5Q8WYR1 880 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 ZNF707Q96C28 371 aaPredicted RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 PLIN2Q99541 437 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 WDR6Q9NNW5 1121 aaKnown RBP20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 LIMD1Q9UGP4 676 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 GDAQ9Y2T3 454 aa20.76■□□□□ 0.91
TMEM88B-201ENST00000378821 SLC12A3P55017 1021 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 ELAVL2Q12926 359 aaKnown RBP20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 LNX1Q8TBB1 728 aaPredicted RBP20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 ACSF2Q96CM8 615 aaPredicted RBP20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 CLSTN3Q9BQT9 956 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 TTPALQ9BTX7 342 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 MRPL4Q9BYD3 311 aaKnown RBP20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 CDT1Q9H211 546 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 KMT5AQ9NQR1 393 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 ZDHHC7Q9NXF8 308 aa20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 MORC2Q9Y6X9 1032 aaPredicted RBP20.75■□□□□ 0.91
TMEM88B-201ENST00000378821 SLC39A14Q15043 492 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 UPP1Q16831 310 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 PALB2Q86YC2 1186 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 LRRC15Q8TF66 581 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 CDK5RAP3Q96JB5 506 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 UROC1Q96N76 676 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 PRRX2Q99811 253 aa20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 SRPRBQ9Y5M8 271 aaKnown RBP20.74■□□□□ 0.91
TMEM88B-201ENST00000378821 SMIM28A0A1B0GU29 152 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 N4BP1O75113 896 aaKnown RBP20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 RFPL2O75678 378 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 MCF2P10911 925 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 PLS3P13797 630 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 FGFR3P22607 806 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 UBA7P41226 1012 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 NHLH1Q02575 133 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 STK38Q15208 465 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 SPECC1Q5M775 1068 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 IER5LQ5T953 404 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 FAM171A1Q5VUB5 890 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 PDXDC1Q6P996 788 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 DCLRE1AQ6PJP8 1040 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 PRSS55Q6UWB4 352 aaPredicted RBP20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 USP49Q70CQ1 688 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 ZBTB33Q86T24 672 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 SUGP1Q8IWZ8 645 aaKnown RBP20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 CEP120Q8N960 986 aa20.73■□□□□ 0.91
TMEM88B-201ENST00000378821 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 372.2 ms