RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 AARSP49588 968 aaKnown RBP eCLIP20.94■□□□□ 0.94
SSU72-204ENST00000378726 SRLQ86TD4 932 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 GSPT2Q8IYD1 628 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 CAPN6Q9Y6Q1 641 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 TARSL2A2RTX5 802 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 RPS6KA5O75582 802 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 TNNI1P19237 187 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 CLDN10P78369 228 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 TNFAIP2Q03169 654 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 CKAP4Q07065 602 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 ZBTB41Q5SVQ8 909 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 PPM1KQ8N3J5 372 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 RNF10Q8N5U6 811 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 IPO4Q8TEX9 1081 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 KAT5Q92993 513 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 ACO2Q99798 780 aaKnown RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 PACSIN1Q9BY11 444 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 RBAKQ9NYW8 714 aaPredicted RBP20.94■□□□□ 0.94
SSU72-204ENST00000378726 PASKQ96RG2 1323 aa20.94■□□□□ 0.94
SSU72-204ENST00000378726 DDX3XO00571 662 aaKnown RBP eCLIP20.93■□□□□ 0.94
SSU72-204ENST00000378726 MAGEB2O15479 319 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 TOM1L1O75674 476 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 HARSP12081 509 aaKnown RBP20.93■□□□□ 0.94
SSU72-204ENST00000378726 NAP1L1P55209 391 aaKnown RBP20.93■□□□□ 0.94
SSU72-204ENST00000378726 WNT7BP56706 349 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 LMBRD2Q68DH5 695 aaPredicted RBP20.93■□□□□ 0.94
SSU72-204ENST00000378726 CAGE1Q8TC20 777 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 ADCY6O43306 1168 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 IVLP07476 585 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 MMP3P08254 477 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 MYBL2P10244 700 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 MCM3P25205 808 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 MAP9Q49MG5 647 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 SEZ6Q53EL9 994 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 ZBTB33Q86T24 672 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 FAM84AQ96KN4 292 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 ZFYVE28Q9HCC9 887 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 FLRT1Q9NZU1 646 aa20.93■□□□□ 0.94
SSU72-204ENST00000378726 RRP15Q9Y3B9 282 aaKnown RBP20.93■□□□□ 0.94
SSU72-204ENST00000378726 INO80B-WBP1J3KQ70 363 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 DYNC1LI2O43237 492 aaPredicted RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 BUB1O43683 1085 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 HOXC6P09630 235 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 MFAP3P55082 362 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 PTENP60484 403 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 C2orf54Q08AI8 447 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 PRPF4BQ13523 1007 aaKnown RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 DGKDQ16760 1214 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 LRRC31Q6UY01 552 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 C15orf39Q6ZRI6 1047 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 C10orf67Q8IYJ2 551 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 SLC30A5Q8TAD4 765 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 RIN2Q8WYP3 895 aaPredicted RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 NT5C1BQ96P26 610 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 NOX5Q96PH1 765 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 INO80BQ9C086 356 aaPredicted RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 FZD8Q9H461 694 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 ACKR2O00590 384 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 C4BPAP04003 597 aaKnown RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 KIF22Q14807 665 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 DNAAF5Q86Y56 855 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 GLYCTKQ8IVS8 523 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 COG1Q8WTW3 980 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 U2AF1L4Q8WU68 220 aaKnown RBP20.92■□□□□ 0.94
SSU72-204ENST00000378726 KREMEN1Q96MU8 473 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 ALS2CR12Q96Q35 445 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 JRKLQ9Y4A0 524 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 TLL2Q9Y6L7 1015 aa20.92■□□□□ 0.94
SSU72-204ENST00000378726 FAM155AB1AL88 458 aaPredicted RBP20.91■□□□□ 0.94
SSU72-204ENST00000378726 HOXD8P13378 290 aaPredicted RBP20.91■□□□□ 0.94
SSU72-204ENST00000378726 CYP2B6P20813 491 aa20.91■□□□□ 0.94
SSU72-204ENST00000378726 USP8P40818 1118 aa20.91■□□□□ 0.94
SSU72-204ENST00000378726 CCNI2Q6ZMN8 369 aaPredicted RBP20.91■□□□□ 0.94
SSU72-204ENST00000378726 LNX1Q8TBB1 728 aaPredicted RBP20.91■□□□□ 0.94
SSU72-204ENST00000378726 HELQQ8TDG4 1101 aa20.91■□□□□ 0.94
SSU72-204ENST00000378726 TATDN2Q93075 761 aa20.91■□□□□ 0.94
SSU72-204ENST00000378726 NENFQ9UMX5 172 aa20.91■□□□□ 0.94
SSU72-204ENST00000378726 ANO9A1A5B4 782 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 TNFAIP3P21580 790 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 ZACNQ401N2 412 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 USP6NLQ92738 828 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 ELMO3Q96BJ8 720 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 HINFPQ9BQA5 517 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 SYT11Q9BT88 431 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 MINDY3Q9H8M7 445 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 DOCK3Q8IZD9 2030 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 TMOD1P28289 359 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 CCL14Q16627 93 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 MTHFD1LQ6UB35 978 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 PI4K2AQ9BTU6 479 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 AKT3Q9Y243 479 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 COL1A2P08123 1366 aa20.9■□□□□ 0.94
SSU72-204ENST00000378726 PTPRJQ12913 1337 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 CNTNAP2Q9UHC6 1331 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 H2AFZP0C0S5 128 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 MCL1Q07820 350 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 PPFIA1Q13136 1202 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 BIRC3Q13489 604 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 TSHZ1Q6ZSZ6 1077 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms