RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 PPP1R18Q6NYC8 613 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 RHPN2Q8IUC4 686 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 CKAP2Q8WWK9 683 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 UPF3AQ9H1J1 476 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 TBC1D23Q9NUY8 699 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 SERPINB13Q9UIV8 391 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 PNMA3Q9UL41 463 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 H0YCG3 227 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 HSPA4LO95757 839 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 KRT19P08727 400 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 NUDT17P0C025 328 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 ATP6V1B1P15313 513 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 MMP13P45452 471 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 RPL21P46778 160 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 AP1B1Q10567 949 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 MIS18BP1Q6P0N0 1132 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 MAB21L3Q8N8X9 362 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 DAGLBQ8NCG7 672 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 FAF2Q96CS3 445 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 CEP95Q96GE4 821 aa9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-201ENST00000377327 EPHB6O15197 1021 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 TLR3O15455 904 aaKnown RBP9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 KRT10P13645 584 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 MTFR1Q15390 333 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 MIIPQ5JXC2 388 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 EGFL6Q8IUX8 553 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 CNBD1Q8NA66 436 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 SCFD2Q8WU76 684 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 CHURC1Q8WUH1 139 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 DEPDC1BQ8WUY9 529 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 PPP2R3CQ969Q6 453 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 CCDC138Q96M89 665 aa9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.88
CRNKL1-201ENST00000377327 PPIP5K2O43314 1243 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ADCY3O60266 1144 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 PDE5AO76074 875 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CBX6O95503 412 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SAT1P21673 171 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 TPP2P29144 1249 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF268Q14587 947 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CERKLQ49MI3 558 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CWF19L1Q69YN2 538 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 KLC3Q6P597 504 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SCUBE1Q8IWY4 988 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 GABPB2Q8TAK5 448 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 DEPTORQ8TB45 409 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SH3RF3Q8TEJ3 882 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CATSPER2Q96P56 530 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 KCNK16Q96T55 309 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF184Q99676 751 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 GORASP1Q9BQQ3 440 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 MRPL46Q9H2W6 279 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 MARCOQ9UEW3 520 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 STRNO43815 780 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 NMT1P30419 496 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 GTF2IP78347 998 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 BTKQ06187 659 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 BTBD6Q96KE9 485 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 BTBD10Q9BSF8 475 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 TRPV6Q9H1D0 765 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 BTG4Q9NY30 223 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 CHORDC1Q9UHD1 332 aaPredicted RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF263O14978 683 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SKIV2L2P42285 1042 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 OCA2Q04671 838 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 AUHQ13825 339 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 ZYXQ15942 572 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 TRMT5Q32P41 509 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 C12orf60Q5U649 245 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 RNF43Q68DV7 783 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 C3orf62Q6ZUJ4 267 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 NLRX1Q86UT6 975 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 REEP2Q9BRK0 252 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 SAR1AQ9NR31 198 aa9.58□□□□□ -0.88
CRNKL1-201ENST00000377327 AFF2P51816 1311 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 SUPT3HO75486 399 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 KLHL2O95198 593 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 CLPTM1O96005 669 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 UBXN2AP68543 259 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 CENPCQ03188 943 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 SBK1Q52WX2 424 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 CPXCR1Q8N123 301 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 NEDD1Q8NHV4 660 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 DMAP1Q9NPF5 467 aaPredicted RBP9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 KMT5AQ9NQR1 393 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 TRIM33Q9UPN9 1127 aa9.57□□□□□ -0.88
CRNKL1-201ENST00000377327 JCADQ9P266 1359 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms