RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 GRIK1P39086 918 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 RNF180Q86T96 592 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 FKBP1AP62942 108 aaKnown RBP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 CHMP6Q96FZ7 201 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 GLT1D1Q96MS3 346 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 TUBB6Q9BUF5 446 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 TRPV6Q9H1D0 765 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 PCDHB2Q9Y5E7 798 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 HSD17B4P51659 736 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 MRPS25P82663 173 aaKnown RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 TMEM62Q0P6H9 643 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 RCN2Q14257 317 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 SV2CQ496J9 727 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 LRGUKQ96M69 825 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 CLGNO14967 610 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 CLTAP09496 248 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 CYP2C19P33261 490 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 DHX34Q14147 1143 aaKnown RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 CCDC137Q6PK04 289 aaKnown RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 TTC7AQ9ULT0 858 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 COPEO14579 308 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 KRT14P02533 472 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 PTPAQ15257 358 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 FAM163AQ96GL9 167 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 FARP1Q9Y4F1 1045 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 USH1CQ9Y6N9 552 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 MROH1Q8NDA8 1641 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 PPP1R12AO14974 1030 aaPredicted RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 RAD51Q06609 339 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 GPS1Q13098 491 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 ZNF484Q5JVG2 852 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 TARS2Q9BW92 718 aaKnown RBP18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 NT5C1AQ9BXI3 368 aa18.94■□□□□ 0.62
CLSTN1-202ENST00000377298 TTC4O95801 387 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 PCSK1P29120 753 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 AP1B1Q10567 949 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 PDCD6IPQ8WUM4 868 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 SPON2Q9BUD6 331 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 FAM8A1Q9UBU6 413 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 TBX20Q9UMR3 447 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 APOL1O14791 398 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 NOP14P78316 857 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 ENGASEQ8NFI3 743 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 A0A1W2PQJ5 194 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 HNRNPH2P55795 449 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 RNPC3Q96LT9 517 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 EHD2Q9NZN4 543 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 TJP2Q9UDY2 1190 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 GALCP54803 685 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 IFT88Q13099 833 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 GRB10Q13322 594 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 SENP7Q9BQF6 1050 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 NIF3L1Q9GZT8 377 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 KIAA1683Q9H0B3 1180 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 PACSIN2Q9UNF0 486 aaPredicted RBP18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 FHOD1Q9Y613 1164 aa18.93■□□□□ 0.62
CLSTN1-202ENST00000377298 BAG2O95816 211 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 GRIN1Q05586 938 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SPARCL1Q14515 664 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 KRT33BQ14525 404 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 RCOR2Q8IZ40 523 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SDCCAG3Q96C92 435 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SNF8Q96H20 258 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 VCX3AQ9NNX9 186 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 PDGFRAP16234 1089 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 NLRP11P59045 1033 aaKnown RBP18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 DCAF4L1Q3SXM0 396 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 TRAPPC11Q7Z392 1133 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 CHP1Q99653 195 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 IDI2Q9BXS1 227 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 C17orf102A2RUQ5 167 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SHMT1P34896 483 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 Q4G0T1 1027 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 PCNX4Q63HM2 1172 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 PLEKHA5Q9HAU0 1116 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 VEGFAP15692 232 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SSTR3P32745 418 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 PMS2P54278 862 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 MUM1Q2TAK8 710 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 AGPAT5Q9NUQ2 364 aa18.92■□□□□ 0.62
CLSTN1-202ENST00000377298 SUPT20HL2P0C7V6 817 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 PNPLA4P41247 253 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 NAA30Q147X3 362 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 MTF1Q14872 753 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 TRIM67Q6ZTA4 783 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 ZNF677Q86XU0 584 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 DCP1BQ8IZD4 617 aaKnown RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 TAF1DQ9H5J8 278 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 AGPAT3Q9NRZ7 376 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 WDR91A4D1P6 747 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 SLC9A1P19634 815 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 PIGHQ14442 188 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 NAB2Q15742 525 aa18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 A0A087WUV0 522 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-202ENST00000377298 GOLGA8MH3BSY2 632 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms