RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 CRAMP1Q96RY5 1269 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 SERINC2Q96SA4 455 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
SSX3-202ENST00000376893 CERS4Q9HA82 394 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 RC3H2Q9HBD1 1191 aaKnown RBP6.88□□□□□ -1.31
SSX3-202ENST00000376893 KIAA1586Q9HCI6 787 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
SSX3-202ENST00000376893 TMEM98Q9Y2Y6 226 aa6.88□□□□□ -1.31
SSX3-202ENST00000376893 GRM8O00222 908 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 MEIS1O00470 390 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 SNX2O60749 519 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 GNAT1P11488 350 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 MYF5P13349 255 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 OSMP13725 252 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 FXR1P51114 621 aaKnown RBP eCLIP6.87□□□□□ -1.31
SSX3-202ENST00000376893 SF3B3Q15393 1217 aaKnown RBP6.87□□□□□ -1.31
SSX3-202ENST00000376893 AOC3Q16853 763 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 MUM1Q2TAK8 710 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 SFRP5Q5T4F7 317 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 MBLAC2Q68D91 279 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 PGBD2Q6P3X8 592 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 CYP2R1Q6VVX0 501 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 ESPNLQ6ZVH7 1005 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 RSAD2Q8WXG1 361 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 FRAT1Q92837 279 aaPredicted RBP6.87□□□□□ -1.31
SSX3-202ENST00000376893 USP13Q92995 863 aaPredicted RBP6.87□□□□□ -1.31
SSX3-202ENST00000376893 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 PTCHD1Q96NR3 888 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 LRRC27Q9C0I9 530 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 KMT5AQ9NQR1 393 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 KCNH7Q9NS40 1196 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 CLDND1Q9NY35 253 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 GMPR2Q9P2T1 348 aaKnown RBP6.87□□□□□ -1.31
SSX3-202ENST00000376893 MINPP1Q9UNW1 487 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 SRPK3Q9UPE1 567 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 ATP6V0A2Q9Y487 856 aa6.87□□□□□ -1.31
SSX3-202ENST00000376893 CACNA1FO60840 1977 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 RTL9Q8NET4 1388 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ZNF646O15015 1829 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 A0A088AWK7 358 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 DDX3XO00571 662 aaKnown RBP eCLIP6.86□□□□□ -1.31
SSX3-202ENST00000376893 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ALDH2P05091 517 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 SNRPBP14678 240 aaKnown RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 ABCB4P21439 1286 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 PTX3P26022 381 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 KLRK1P26718 216 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ALDH1B1P30837 517 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 GJA4P35212 333 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 TECP42680 631 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 FOXO4P98177 505 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 CCDC38Q502W7 563 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 SEZ6L2Q6UXD5 910 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 DPP8Q6V1X1 898 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 PDZD4Q76G19 769 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 DAAM2Q86T65 1068 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 FMR1NBQ8N0W7 255 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 TMEM130Q8N3G9 435 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 TTLL11Q8NHH1 800 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 KAZALD1Q96I82 304 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 CGRRF1Q99675 332 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 APOL5Q9BWW9 433 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 QRSL1Q9H0R6 528 aaKnown RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 SEMA6CQ9H3T2 930 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 EPB41L1Q9H4G0 881 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 EVLQ9UI08 416 aaPredicted RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 TPCN1Q9ULQ1 816 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 NUB1Q9Y5A7 615 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 WDR90Q96KV7 1748 aa6.86□□□□□ -1.31
SSX3-202ENST00000376893 DICER1Q9UPY3 1922 aaKnown RBP6.86□□□□□ -1.31
SSX3-202ENST00000376893 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 DYTNA2CJ06 578 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 WTIPA6NIX2 430 aaPredicted RBP6.85□□□□□ -1.31
SSX3-202ENST00000376893 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 SLC16A6O15403 523 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 PPIP5K2O43314 1243 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 NPHS1O60500 1241 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 FGF18O76093 207 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 UFL1O94874 794 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 CSTBP04080 98 aaKnown RBP6.85□□□□□ -1.31
SSX3-202ENST00000376893 THP07101 528 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 KRT15P19012 456 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 MCCP23508 829 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 RAC1P63000 192 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 SWSAP1Q6NVH7 229 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 RFX8Q6ZV50 586 aa6.85□□□□□ -1.31
SSX3-202ENST00000376893 SYDE1Q6ZW31 735 aaPredicted RBP6.85□□□□□ -1.31
SSX3-202ENST00000376893 SUGP1Q8IWZ8 645 aaKnown RBP6.85□□□□□ -1.31
SSX3-202ENST00000376893 RTKN2Q8IZC4 609 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms