RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 C2CD2LO14523 706 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 TADA2AO75478 443 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 GUCY2CP25092 1073 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 CDC25AP30304 524 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 CA8P35219 290 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 RTP2Q5QGT7 225 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 DTHD1Q6ZMT9 781 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 TDRD5Q8NAT2 981 aaKnown RBP16.11■□□□□ 0.17
CLIC1-206ENST00000375779 DEPTORQ8TB45 409 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 ACSF2Q96CM8 615 aaPredicted RBP16.11■□□□□ 0.17
CLIC1-206ENST00000375779 ADPGKQ9BRR6 497 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 PRKD2Q9BZL6 878 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 EPS15L1Q9UBC2 864 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
CLIC1-206ENST00000375779 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 RFPL2O75678 378 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 PDGFBP01127 241 aaPredicted RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 ASGR2P07307 311 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 FGFR3P22607 806 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 MCM2P49736 904 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 VCPP55072 806 aaKnown RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 CREMQ03060 361 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 UPP1Q16831 310 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 DCLRE1AQ6PJP8 1040 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
CLIC1-206ENST00000375779 SPIRE2Q8WWL2 714 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 NXPE3Q969Y0 559 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 B3GALT6Q96L58 329 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 TTPALQ9BTX7 342 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 KIFC3Q9BVG8 833 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 RUSC1Q9BVN2 902 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 KCNK12Q9HB15 430 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 IGSF9Q9P2J2 1179 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 CACNG4Q9UBN1 327 aa16.1■□□□□ 0.17
CLIC1-206ENST00000375779 SF3B1O75533 1304 aaKnown RBP eCLIP16.1■□□□□ 0.178e-6■■■■■ 107
CLIC1-206ENST00000375779 NOTCH4Q99466 2003 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SMIM28A0A1B0GU29 152 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SLC26A4O43511 780 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 HIP1RO75146 1068 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 ZMYND10O75800 440 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 KIF4AO95239 1232 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 POU2F2P09086 479 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
CLIC1-206ENST00000375779 GRM5P41594 1212 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 TDGQ13569 410 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 CUL4AQ13619 759 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SUGP1Q8IWZ8 645 aaKnown RBP16.09■□□□□ 0.17
CLIC1-206ENST00000375779 RIN2Q8WYP3 895 aaPredicted RBP16.09■□□□□ 0.17
CLIC1-206ENST00000375779 RABGGTAQ92696 567 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 SMOC2Q9H3U7 446 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 KCND2Q9NZV8 630 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 KCNG1Q9UIX4 513 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 FBXW11Q9UKB1 542 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
CLIC1-206ENST00000375779 MEFVO15553 781 aaPredicted RBP16.08■□□□□ 0.16
CLIC1-206ENST00000375779 TBC1D4O60343 1298 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 KCNE1P15382 129 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 HOXA9P31269 272 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 CLCN5P51795 746 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 PTPN5P54829 565 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 PEX3P56589 373 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 RAB33AQ14088 237 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 UVSSAQ2YD98 709 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 PDXDC1Q6P996 788 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.16
CLIC1-206ENST00000375779 ALYREFQ86V81 257 aaKnown RBP16.08■□□□□ 0.16
CLIC1-206ENST00000375779 PALB2Q86YC2 1186 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 UROC1Q96N76 676 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 CDT1Q9H211 546 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLIC1-206ENST00000375779 CHMP5Q9NZZ3 219 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 WDR87Q6ZQQ6 2873 aa16.08■□□□□ 0.16
CLIC1-206ENST00000375779 CITO14578 2027 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 RIF1Q5UIP0 2472 aaKnown RBP16.07■□□□□ 0.16
CLIC1-206ENST00000375779 ZFHX2Q9C0A1 2572 aaPredicted RBP16.07■□□□□ 0.16
CLIC1-206ENST00000375779 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 ANHXE9PGG2 379 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 HNRNPA1P09651 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLIC1-206ENST00000375779 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 NPR3P17342 541 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 RPL17P18621 184 aaKnown RBP16.07■□□□□ 0.16
CLIC1-206ENST00000375779 GJB2P29033 226 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 MRE11P49959 708 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 MRPL58Q14197 206 aaKnown RBP16.07■□□□□ 0.16
CLIC1-206ENST00000375779 TMEM119Q4V9L6 283 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 ARSHQ5FYA8 562 aa16.07■□□□□ 0.16
CLIC1-206ENST00000375779 FAM171A1Q5VUB5 890 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms