RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 AXDND1Q5T1B0 1012 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 OSBPL6Q9BZF3 934 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 TTC12Q9H892 705 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 GMEB2Q9UKD1 530 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 CDV3Q9UKY7 258 aaKnown RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 MRPS23Q9Y3D9 190 aaKnown RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 POTEMA6NI47 508 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 TRAPPC3O43617 180 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 NEMFO60524 1076 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 LRRN2O75325 713 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 LYPLA2O95372 231 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 PAPLNO95428 1278 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 ATP2B1P20020 1258 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 ELF1P32519 619 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 TXKP42681 527 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 RARRES1P49788 294 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 MAPK6Q16659 721 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 UVSSAQ2YD98 709 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.6■□□□□ 0.09
PTCH1-202ENST00000375271 TPRG1Q6ZUI0 275 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 DEPTORQ8TB45 409 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 NELL2Q99435 816 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 CLSTN3Q9BQT9 956 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 RPP25Q9BUL9 199 aaKnown RBP15.6■□□□□ 0.09
PTCH1-202ENST00000375271 TM6SF1Q9BZW5 370 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 LTB4R2Q9NPC1 389 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 CACNG4Q9UBN1 327 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 KCNH3Q9ULD8 1083 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 USP18Q9UMW8 372 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 DMXL1Q9Y485 3027 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 WDR87Q6ZQQ6 2873 aa15.6■□□□□ 0.09
PTCH1-202ENST00000375271 ZNF292O60281 2723 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
PTCH1-202ENST00000375271 RECQL4O94761 1208 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 LRG1P02750 347 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 GLULP15104 373 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 OR1D2P34982 312 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 LMNB2Q03252 620 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 SPIRE1Q08AE8 756 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 ZNF852Q6ZMS4 543 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 GSTCDQ8NEC7 633 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 ITFG1Q8TB96 612 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 LNX1Q8TBB1 728 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-202ENST00000375271 OXER1Q8TDS5 423 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 ING5Q8WYH8 240 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 PAAF1Q9BRP4 392 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 ZSCAN32Q9NX65 697 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 SNTG2Q9NY99 539 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 ORC3Q9UBD5 711 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-202ENST00000375271 SMG5Q9UPR3 1016 aaKnown RBP15.59■□□□□ 0.09
PTCH1-202ENST00000375271 GDAQ9Y2T3 454 aa15.59■□□□□ 0.09
PTCH1-202ENST00000375271 PRR5-ARHGAP8B1AHC4 643 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 PRRG1O14668 218 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 B3GAT3O94766 335 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 PRKCBP05771 671 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 ARHGAP8P85298 464 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 SCRN1Q12765 414 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 PPP2R5AQ15172 486 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 DCAF4L1Q3SXM0 396 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 RTL10Q7L3V2 364 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 NPAS3Q8IXF0 933 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 ERMNQ8TAM6 284 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 DLL3Q9NYJ7 618 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 CDY1Q9Y6F8 540 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 CACNA1AO00555 2505 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 FANCMQ8IYD8 2048 aa15.58■□□□□ 0.08
PTCH1-202ENST00000375271 ARHGEF35A5YM69 484 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 POU2F2P09086 479 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 XRCC6P12956 609 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTCH1-202ENST00000375271 CD72P21854 359 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 YARSP54577 528 aaKnown RBP15.57■□□□□ 0.08
PTCH1-202ENST00000375271 RAB33AQ14088 237 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 ANKRD1Q15327 319 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 ANKS3Q6ZW76 656 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 NOSTRINQ8IVI9 506 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-202ENST00000375271 ELMOD1Q8N336 334 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 SUMF1Q8NBK3 374 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 MCRS1Q96EZ8 462 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 IFT74Q96LB3 600 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 UROC1Q96N76 676 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 HSD17B14Q9BPX1 270 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 DDX23Q9BUQ8 820 aaKnown RBP15.57■□□□□ 0.08
PTCH1-202ENST00000375271 PDZD7Q9H5P4 517 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 BRD9Q9H8M2 597 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 GPRC5CQ9NQ84 441 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 HCFC1R1Q9NWW0 138 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 GDE1Q9NZC3 331 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 DAXXQ9UER7 740 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-202ENST00000375271 FRYLO94915 3013 aa15.57■□□□□ 0.08
PTCH1-202ENST00000375271 ECI2O75521 394 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 NRLP54845 237 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 NR5A1Q13285 461 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 FAM126AQ9BYI3 521 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-202ENST00000375271 TUFT1Q9NNX1 390 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 TOPORSQ9NS56 1045 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms