RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 CLMPQ9H6B4 373 aa11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 SEC63Q9UGP8 760 aaKnown RBP11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 ABCA7Q8IZY2 2146 aa11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 APC2O95996 2303 aa11.3□□□□□ -0.6
HLA-DRA-201ENST00000374982 MEIS1O00470 390 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 OATP04181 439 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 ITGA4P13612 1032 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 GBP1P32455 592 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 MAPK8P45983 427 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 SEMA3BQ13214 749 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 CCNI2Q6ZMN8 369 aaPredicted RBP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 RALGPS2Q86X27 583 aaPredicted RBP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 SMG8Q8ND04 991 aaKnown RBP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 FAM200AQ8TCP9 573 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 KIAA1549LQ6ZVL6 1849 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
HLA-DRA-201ENST00000374982 PSAPP07602 524 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 PTPN2P17706 415 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 CCR2P41597 374 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 PRKCEQ02156 737 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 CYP2U1Q7Z449 544 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 RHPN2Q8IUC4 686 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 MFSD6LQ8IWD5 586 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 CAMKK1Q8N5S9 505 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 HASPINQ8TF76 798 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 HHIPQ96QV1 700 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 KALRNO60229 2985 aa11.28□□□□□ -0.6
HLA-DRA-201ENST00000374982 URB1O60287 2271 aaKnown RBP11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 A0A087WV48 116 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 HEPACAM2A8MVW5 462 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 IPO5O00410 1097 aaKnown RBP11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 TADA2AO75478 443 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 MS4A1P11836 297 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 OR1D2P34982 312 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 LMAN2Q12907 356 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 RAB33AQ14088 237 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 ZNF746Q6NUN9 644 aaPredicted RBP11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 RTL10Q7L3V2 364 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 KSR1Q8IVT5 923 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 SMAP1Q8IYB5 467 aaPredicted RBP11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 CORO1BQ9BR76 489 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 NRBP2Q9NSY0 501 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 HES2Q9Y543 173 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 IPPQ9Y573 584 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.61
HLA-DRA-201ENST00000374982 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 NUP210Q8TEM1 1887 aaPredicted RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 CHADO15335 359 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 MAP3K13O43283 966 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 MICAL2O94851 1124 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 TARBP2Q15633 366 aaKnown RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 PLA2G4DQ86XP0 818 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 YAF2Q8IY57 180 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 ZSCAN18Q8TBC5 510 aaPredicted RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 ADAMTS14Q8WXS8 1223 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 RSPRY1Q96DX4 576 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 TRPV4Q9HBA0 871 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 IFT122Q9HBG6 1241 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 DKK4Q9UBT3 224 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 TCEAL9Q9UHQ7 104 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 EVLQ9UI08 416 aaPredicted RBP11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 INVSQ9Y283 1065 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
HLA-DRA-201ENST00000374982 TSC2P49815 1807 aa11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 FAM86B1E9PN63 330 aa11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 PYCARD-AS1I3L0S3 204 aa11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 ZNF197O14709 1029 aa11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 IFIT3O14879 490 aaKnown RBP11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 ATG13O75143 517 aa11.25□□□□□ -0.61
HLA-DRA-201ENST00000374982 LRG1P02750 347 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms