RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 DMAC2Q9NW81 257 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 RWDD3Q9Y3V2 267 aa16.35■□□□□ 0.21
HSPG2-201ENST00000374673 MRPL42Q9Y6G3 142 aaKnown RBP16.35■□□□□ 0.21
HSPG2-201ENST00000374673 TRIOBPQ9H2D6 2365 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 POMCP01189 267 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 NR3C1P04150 777 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 KCNE1P15382 129 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 CCNE1P24864 410 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 NLRP12P59046 1061 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 TAP1Q03518 808 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 PPP2R3AQ06190 1150 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 HSP90AA2PQ14568 343 aaPredicted RBP16.34■□□□□ 0.21
HSPG2-201ENST00000374673 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 EDRF1Q3B7T1 1238 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 PPP2R2DQ66LE6 453 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
HSPG2-201ENST00000374673 FOXR2Q6PJQ5 311 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 BRSK2Q8IWQ3 736 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 XXYLT1Q8NBI6 393 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 P2RX5Q93086 422 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 SAMD11Q96NU1 681 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 TSPAN18Q96SJ8 248 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 CXCL16Q9H2A7 254 aa16.34■□□□□ 0.21
HSPG2-201ENST00000374673 RANBP2P49792 3224 aaKnown RBP16.34■□□□□ 0.21
HSPG2-201ENST00000374673 SMIM28A0A1B0GU29 152 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 GOLGA8IPA6NC78 632 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 GOLGA8JA6NMD2 632 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 THP07101 528 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 LAG3P18627 525 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 CYP2J2P51589 502 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 ERVK-21P61565 698 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 RNASELQ05823 741 aaKnown RBP16.33■□□□□ 0.2
HSPG2-201ENST00000374673 LRRC63Q05C16 580 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 DSC1Q08554 894 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 NAB2Q15742 525 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 MLKLQ8NB16 471 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 LRCH3Q96II8 777 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 PPP1R10Q96QC0 940 aaKnown RBP16.33■□□□□ 0.2
HSPG2-201ENST00000374673 TGS1Q96RS0 853 aaKnown RBP16.33■□□□□ 0.2
HSPG2-201ENST00000374673 TSG101Q99816 390 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 ASB7Q9H672 318 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 HCSTQ9UBK5 93 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
HSPG2-201ENST00000374673 CARNS1A5YM72 827 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 ZNF233A6NK53 670 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 EXOC3O60645 756 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 DDHD2O94830 711 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 IL18RAPO95256 599 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 NR2F2P24468 414 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 RPL13P26373 211 aaKnown RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 PMS1P54277 932 aaKnown RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 PAK1Q13153 545 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 SNRNP35Q16560 246 aaKnown RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 GLRA4Q5JXX5 417 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 ZNF280BQ86YH2 543 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 CBWD2Q8IUF1 395 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 ZC3H3Q8IXZ2 948 aaKnown RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 COLGALT2Q8IYK4 626 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 ZMAT2Q96NC0 199 aaKnown RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 FAM193BQ96PV7 902 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 TMEM175Q9BSA9 504 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 AAASQ9NRG9 546 aa16.32■□□□□ 0.2
HSPG2-201ENST00000374673 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-201ENST00000374673 COL4A4P53420 1690 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-201ENST00000374673 BICDL2A1A5D9 508 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 TRIM49BA6NDI0 452 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 C5orf67F2Z3F1 127 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 MAPK13O15264 365 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 B4GALT3O60512 393 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 BMPR1AP36894 532 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 ADAM9Q13443 819 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 TUSC3Q13454 348 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 SURF1Q15526 300 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 SPOUT1Q5T280 376 aaKnown RBP16.31■□□□□ 0.2
HSPG2-201ENST00000374673 KLHL10Q6JEL2 608 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 COLGALT1Q8NBJ5 622 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
HSPG2-201ENST00000374673 C17orf80Q9BSJ5 609 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 PLVAPQ9BX97 442 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 ZNF576Q9H609 170 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 SLC38A7Q9NVC3 462 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 DERAQ9Y315 318 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 PLXNA4Q9HCM2 1894 aa16.31■□□□□ 0.2
HSPG2-201ENST00000374673 ZC3H11AO75152 810 aaKnown RBP eCLIP16.3■□□□□ 0.2
HSPG2-201ENST00000374673 RB1P06400 928 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 WNT7BP56706 349 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms