RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DPH5Q9H2P9 285 aa14.97□□□□□ -0.01
HMGCL-203ENST00000374490 CNOT10Q9H9A5 744 aaKnown RBP14.97□□□□□ -0.01
HMGCL-203ENST00000374490 KMT5AQ9NQR1 393 aa14.97□□□□□ -0.01
HMGCL-203ENST00000374490 FAM169AQ9Y6X4 670 aa14.97□□□□□ -0.01
HMGCL-203ENST00000374490 CASP8AP2Q9UKL3 1982 aa14.97□□□□□ -0.01
HMGCL-203ENST00000374490 CCDC169A6NNP5 214 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 TISP43B9A030 160 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 SGPL1O95470 568 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
HMGCL-203ENST00000374490 CHRNB2P17787 502 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 GARTP22102 1010 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 NPTX2P47972 431 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 OAZ1P54368 228 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 CDR2Q01850 454 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 CYP1B1Q16678 543 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 PPM1KQ8N3J5 372 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 FBXL13Q8NEE6 735 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 MCPH1Q8NEM0 835 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 PARD3BQ8TEW8 1205 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 DHX38Q92620 1227 aaKnown RBP14.96□□□□□ -0.01
HMGCL-203ENST00000374490 TRIM51Q9BSJ1 452 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 KIAA1586Q9HCI6 787 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 MTRF1LQ9UGC7 380 aaKnown RBP14.96□□□□□ -0.01
HMGCL-203ENST00000374490 PCDHA10Q9Y5I2 948 aa14.96□□□□□ -0.01
HMGCL-203ENST00000374490 NFASCO94856 1347 aa14.96□□□□□ -0.02
HMGCL-203ENST00000374490 MYO1FO00160 1098 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 KIAA0754O94854 1291 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CCNE2O96020 404 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 NUDT17P0C025 328 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 COMTP21964 271 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 FNTAP49354 379 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PPP2R2AP63151 447 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 FMO1Q01740 532 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 IFFO1Q0D2I5 559 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 VGLL4Q14135 290 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 NAA35Q5VZE5 725 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TADA2BQ86TJ2 420 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF564Q8TBZ8 553 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 HELQQ8TDG4 1101 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 MAIP1Q8WWC4 291 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CD101Q93033 1021 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF653Q96CK0 615 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TRIM11Q96F44 468 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CDHR1Q96JP9 859 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 KREMEN1Q96MU8 473 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PCDHB18PQ96TA0 734 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZDHHC18Q9NUE0 388 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TRPC6Q9Y210 931 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 STAM2O75886 525 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 FAM107AO95990 144 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PSAPP07602 524 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PAEPP09466 180 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 MYBL1P10243 752 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CYP11B1P15538 503 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CNGA1P29973 690 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PTGIRP43119 386 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TM4SF4P48230 202 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PEX5P50542 639 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 GUCY1A3Q02108 690 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CYP24A1Q07973 514 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF211Q13398 564 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 MESDQ14696 234 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 KRT71Q3SY84 523 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TTC19Q6DKK2 380 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 YTHDF3Q7Z739 585 aaKnown RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 NLRP14Q86W24 1093 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CBWD2Q8IUF1 395 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 C12orf50Q8NA57 414 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF473Q8WTR7 871 aaKnown RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF296Q8WUU4 475 aaPredicted RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 MAGOHBQ96A72 148 aaKnown RBP14.95□□□□□ -0.02
HMGCL-203ENST00000374490 NUP85Q9BW27 656 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 CENPHQ9H3R5 247 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 GPRC5CQ9NQ84 441 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 HOMER2Q9NSB8 354 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 RNF146Q9NTX7 359 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 RAB20Q9NX57 234 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 PCDHA3Q9Y5H8 950 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 SNCAIPQ9Y6H5 919 aa14.95□□□□□ -0.02
HMGCL-203ENST00000374490 TESPA1A2RU30 521 aaPredicted RBP14.94□□□□□ -0.02
HMGCL-203ENST00000374490 GOLGA8IPA6NC78 632 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 GOLGA8JA6NMD2 632 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 ANKRD63C9JTQ0 380 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 CYP26A1O43174 497 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 SPOPO43791 374 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 DGAT1O75907 488 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 PMS2P54278 862 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 RWDD2BP57060 319 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 BPIFB4P59827 614 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 GCNT1Q02742 428 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 SLMAPQ14BN4 828 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 TTC31Q49AM3 519 aaPredicted RBP14.94□□□□□ -0.02
HMGCL-203ENST00000374490 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
HMGCL-203ENST00000374490 PLA2G4FQ68DD2 849 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 ACAD10Q6JQN1 1059 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms