RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IZUMO2Q6UXV1 221 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 MPP4Q96JB8 637 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 FGFBP2Q9BYJ0 223 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 RASA4BC9J798 803 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 RASA4O43374 803 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 ATP9BO43861 1147 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 RAD21O60216 631 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 SULT2A1Q06520 285 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CBX3Q13185 183 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CYP1B1Q16678 543 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 P3H1Q32P28 736 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 KRT25Q7Z3Z0 450 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 MCUR1Q96AQ8 359 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 DNAJC19Q96DA6 116 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CLMNQ96JQ2 1002 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CYLDQ9NQC7 956 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 TBC1D7Q9P0N9 293 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 ANGPTL2Q9UKU9 493 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 NUMBLQ9Y6R0 609 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 NPHP3-ACAD11A0A0J9YXS1 232 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 SNAP23O00161 211 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 ZNF189O75820 626 aaPredicted RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 SERPINB3P29508 390 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 SPARCL1Q14515 664 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 PDK4Q16654 411 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 OLFML2BQ68BL8 750 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 GLYCTKQ8IVS8 523 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 UBL4BQ8N7F7 174 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 DENND1AQ8TEH3 1009 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 ARHGEF26Q96DR7 871 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 MAF1Q9H063 256 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 WHRNQ9P202 907 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 MIF4GDA9UHW6 222 aaKnown RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 THAP12O43422 761 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 LMNB1P20700 586 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 KCNJ1P48048 391 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 THOC5Q13769 683 aaKnown RBP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRPF4-201ENST00000374198 TMEM259Q4ZIN3 620 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 KLC3Q6P597 504 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 RHBDF2Q6PJF5 856 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 SCYL3Q8IZE3 742 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 KRT35Q92764 455 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 CATSPER2Q96P56 530 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 UBN1Q9NPG3 1134 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
PRPF4-201ENST00000374198 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 A8MXQ7 604 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 IRS4O14654 1257 aaPredicted RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 ZNF653Q96CK0 615 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 NMD3Q96D46 503 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 SIX2Q9NPC8 291 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 COG5Q9UP83 839 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 SMIM31A0A1B0GVY4 71 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 SPAG7O75391 227 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 CRABP2P29373 138 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 MARCKSL1P49006 195 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 EPHA7Q15375 998 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 PDCD7Q8N8D1 485 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 IRGQQ8WZA9 623 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 POP1Q99575 1024 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 DNAJC17Q9NVM6 304 aaKnown RBP13.73□□□□□ -0.21
PRPF4-201ENST00000374198 GRID1Q9ULK0 1009 aa13.73□□□□□ -0.21
PRPF4-201ENST00000374198 TCRBV7S2A1N4TA0A589 114 aa13.72□□□□□ -0.21
PRPF4-201ENST00000374198 CHRNB2P17787 502 aa13.72□□□□□ -0.21
PRPF4-201ENST00000374198 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRPF4-201ENST00000374198 MAP3K10Q02779 954 aa13.72□□□□□ -0.21
PRPF4-201ENST00000374198 CFAP157Q5JU67 520 aa13.72□□□□□ -0.21
PRPF4-201ENST00000374198 DUS1LQ6P1R4 473 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms