RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NMT1P30419 496 aaKnown RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 KDELC2Q7Z4H8 507 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 RUBCNLQ9H714 662 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 RRM2BQ7LG56 351 aa15.14■□□□□ 0.01
TRAF1-201ENST00000373887 TGS1Q96RS0 853 aaKnown RBP15.14■□□□□ 0.01
TRAF1-201ENST00000373887 KRT38O76015 456 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 PRKCBP05771 671 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 TADA2AO75478 443 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 KCNA2P16389 499 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 CUL3Q13618 768 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 THEMIS2Q5TEJ8 643 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 ZNF513Q8N8E2 541 aaPredicted RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 SEL1LQ9UBV2 794 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 DAB1O75553 588 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 CUL4AQ13619 759 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 SF3B3Q15393 1217 aaKnown RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 PLA2G4FQ68DD2 849 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 BTNL9Q6UXG8 535 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 ZC3H15Q8WU90 426 aaKnown RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 ACAP3Q96P50 834 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 SYNDIG1Q9H7V2 258 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 AGO2Q9UKV8 859 aaKnown RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 NFKBIAP25963 317 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 GNA15P30679 374 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 TEDDM1Q5T9Z0 273 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 LRRC71Q8N4P6 559 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 HNRNPCP07910 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 PMS2P54278 862 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 RAD23BP54727 409 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 KNOP1Q1ED39 458 aaKnown RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 PLEKHM3Q6ZWE6 761 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 NDE1Q9NXR1 346 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.13■□□□□ 0.01
TRAF1-201ENST00000373887 ARHGAP26Q9UNA1 814 aa15.13■□□□□ 0.01
TRAF1-201ENST00000373887 CETPP11597 493 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 KCNH2Q12809 1159 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 LRRC31Q6UY01 552 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ALG13Q9NP73 1137 aaKnown RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 PODXLO00592 558 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 NCK2O43639 380 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ACOT2P49753 483 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 PRR12Q9ULL5 1215 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 USP42Q9H9J4 1324 aaKnown RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 C2CD2LO14523 706 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 KRT8P05787 483 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 AARS2Q5JTZ9 985 aaKnown RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 DDX53Q86TM3 631 aaKnown RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 PANX2Q96RD6 677 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 E9PCH4 1651 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 WDR47O94967 919 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 SOX11P35716 441 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ARFIP2P53365 341 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 FASTKD1Q53R41 847 aaKnown RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ATP11BQ9Y2G3 1177 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 ADCY3O60266 1144 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
TRAF1-201ENST00000373887 GPD1LQ8N335 351 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
TRAF1-201ENST00000373887 C19orf81C9J6K1 198 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 DFFAO00273 331 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 FOXN1O15353 648 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 GH1P01241 217 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SMARCA1P28370 1054 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 KLHL38Q2WGJ6 581 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ANO5Q75V66 913 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 RHOT2Q8IXI1 618 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 STX19Q8N4C7 294 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ATG4CQ96DT6 458 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ORC4O43929 436 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 YIPF2Q9BWQ6 316 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 INTS2Q9H0H0 1204 aaKnown RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 CLCA2Q9UQC9 943 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 TRAF3IP3Q9Y228 551 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 PRR23D1E9PI22 279 aaPredicted RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ARIH2O95376 493 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 PRR23D2P0DMB1 279 aaPredicted RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SYCP2LQ5T4T6 812 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 STOX1Q6ZVD7 989 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SP110Q9HB58 689 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 MRPL40Q9NQ50 206 aaKnown RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 GGT7Q9UJ14 662 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ZNF263O14978 683 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SERPIND1P05546 499 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 NNMTP40261 264 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 KRT72Q14CN4 511 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 DEPDC1Q5TB30 811 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 SPATA2LQ8IUW3 424 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms