RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 TET1Q8NFU7 2136 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 LARP4BQ92615 738 aaKnown RBP13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 FGD4Q96M96 766 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 TGS1Q96RS0 853 aaKnown RBP13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 TMEM109Q9BVC6 243 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 EPB41L5Q9HCM4 733 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 RBM12Q9NTZ6 932 aaKnown RBP13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 MTMR4Q9NYA4 1195 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 NFS1Q9Y697 457 aa13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 COL11A1P12107 1806 aaPredicted RBP13.89□□□□□ -0.19
CHCHD1-202ENST00000372837 PTPRSQ13332 1948 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 H0Y858 1186 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 VWA5AO00534 786 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 LIN7AO14910 233 aaPredicted RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 ZMYND10O75800 440 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 MOCS3O95396 460 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 TTLL1O95922 423 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 PDHBP11177 359 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 RFC2P35250 354 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 USP11P51784 963 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 BYSLQ13895 437 aaKnown RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 TMEM119Q4V9L6 283 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 CYB5D1Q6P9G0 228 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 RASGEF1CQ8N431 466 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 GPATCH11Q8N954 259 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 RAD54LQ92698 747 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 TATDN2Q93075 761 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 MIEF2Q96C03 454 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 PIGSQ96S52 555 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 SUFUQ9UMX1 484 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
CHCHD1-202ENST00000372837 PARP14Q460N5 1801 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 ACACBO00763 2458 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 WDR87Q6ZQQ6 2873 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 MPHOSPH10O00566 681 aaKnown RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 PPP1R12AO14974 1030 aaPredicted RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 GLI1P08151 1106 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 IQCF3P0C7M6 154 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 COPB2P35606 906 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 TECP42680 631 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 CARSP49589 748 aaKnown RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 IRX1P78414 480 aaPredicted RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 SATB1Q01826 763 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 CYP27A1Q02318 531 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 GABPAQ06546 454 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 EHHADHQ08426 723 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 RPS6KA1Q15418 735 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 ZKSCAN8Q15776 578 aaPredicted RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 ANKRD20A8PQ5CZ79 823 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 HYIQ5T013 277 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 HGSNATQ68CP4 663 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 NFRKBQ6P4R8 1299 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 MOXD1Q6UVY6 613 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 BTNL9Q6UXG8 535 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 CLEC10AQ8IUN9 316 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 CUL5Q93034 780 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 RUNDC3BQ96NL0 473 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 JPH2Q9BR39 696 aaPredicted RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 ZBED2Q9BTP6 218 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 NFU1Q9UMS0 254 aa13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 GNEQ9Y223 722 aaKnown RBP13.87□□□□□ -0.19
CHCHD1-202ENST00000372837 CHD6Q8TD26 2715 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 PKD1L2Q7Z442 2459 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 MCM3APO60318 1980 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 E7EVH7 732 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 WDR46O15213 610 aaKnown RBP13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 NUDT17P0C025 328 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 WDR5P61964 334 aaKnown RBP13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 DEFB103AP81534 67 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 RNF187Q5TA31 235 aaPredicted RBP13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 TLK2Q86UE8 772 aa13.86□□□□□ -0.19
CHCHD1-202ENST00000372837 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms