RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 PTPRJQ12913 1337 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 KIAA0391O15091 583 aaKnown RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 GRIN3BO60391 1043 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 MAFO75444 373 aaPredicted RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 NF2P35240 595 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 BIRC3Q13489 604 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 WDR44Q5JSH3 913 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 FGD4Q96M96 766 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 RBAKQ9NYW8 714 aaPredicted RBP13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 AMACRQ9UHK6 382 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 NR2E1Q9Y466 385 aa13.67□□□□□ -0.22
TSC22D3-206ENST00000372397 A0A0B4J269 797 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 ADCY3O60266 1144 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 MTA2O94776 668 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 LMAN1P49257 510 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 PPIL2Q13356 520 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 MOGSQ13724 837 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 C9orf131Q5VYM1 1079 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 NAA35Q5VZE5 725 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 ALS2CLQ60I27 953 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 ADAT2Q7Z6V5 191 aaKnown RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 GLG1Q92896 1179 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■■■■■ 31.3
TSC22D3-206ENST00000372397 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 KCNH4Q9UQ05 1017 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 VNN1O95497 513 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 CYP1A2P05177 515 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 COMTP21964 271 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 MARK3P27448 753 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 SEZ6Q53EL9 994 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 KRT35Q92764 455 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 ZNF653Q96CK0 615 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 OPTNQ96CV9 577 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 BTBD6Q96KE9 485 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 GPR20Q99678 358 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
TSC22D3-206ENST00000372397 MCM3APO60318 1980 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 TTLL13PA6NNM8 815 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 MIF4GDA9UHW6 222 aaKnown RBP13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 HSF2BPO75031 334 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 IVLP07476 585 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 MARCKSL1P49006 195 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 HLTFQ14527 1009 aaKnown RBP eCLIP13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 KCTD2Q14681 263 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 CLEC16AQ2KHT3 1053 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 AADACL2Q6P093 401 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 MAATS1Q7Z4T9 603 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 UBL4BQ8N7F7 174 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 ZNF564Q8TBZ8 553 aaPredicted RBP13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 MMP19Q99542 508 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 ADGRA2Q96PE1 1338 aa13.65□□□□□ -0.22
TSC22D3-206ENST00000372397 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 TTI1O43156 1089 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 SRGAP2CP0DJJ0 459 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 OSBPP22059 807 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 ACTN2P35609 894 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CUL1Q13616 776 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CPNE8Q86YQ8 564 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 FAM167AQ96KS9 214 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 ZIM3Q96PE6 472 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 ZSWIM1Q9BR11 485 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CELF4Q9BZC1 486 aaKnown RBP13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 GTF3C4Q9UKN8 822 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
TSC22D3-206ENST00000372397 CLDN3O15551 220 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms