RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MGAT3Q09327 533 aa19.98■□□□□ 0.79
VEGFA-206ENST00000372077 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-206ENST00000372077 TMC2Q8TDI7 906 aa19.98■□□□□ 0.79
VEGFA-206ENST00000372077 PCMTD1Q96MG8 357 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-206ENST00000372077 TCHPQ9BT92 498 aa19.98■□□□□ 0.79
VEGFA-206ENST00000372077 MFAP3LO75121 409 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 ERLIN2O94905 339 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 MATR3P43243 847 aaKnown RBP eCLIP19.97■□□□□ 0.79
VEGFA-206ENST00000372077 CYP24A1Q07973 514 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 TRIM71Q2Q1W2 868 aaKnown RBP19.97■□□□□ 0.79
VEGFA-206ENST00000372077 DHX38Q92620 1227 aaKnown RBP19.97■□□□□ 0.79
VEGFA-206ENST00000372077 PDZD7Q9H5P4 517 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 CDY2AQ9Y6F7 541 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 A0A1B0GUA9 196 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 OGTO15294 1046 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 CCP110O43303 1012 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 SGPL1O95470 568 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 FGFR4P22455 802 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 C1orf220Q5T0J3 134 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 TCERG1LQ5VWI1 586 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 ZBTB33Q86T24 672 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 CDT1Q9H211 546 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 SIK3Q9Y2K2 1263 aa19.97■□□□□ 0.79
VEGFA-206ENST00000372077 HOXA11P31270 313 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-206ENST00000372077 KCNMA1Q12791 1236 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 CCDC155Q8N6L0 562 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 PARD3BQ8TEW8 1205 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 CPB2Q96IY4 423 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 PNKPQ96T60 521 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 ARGLU1Q9NWB6 273 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-206ENST00000372077 M0QZ92 97 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 CHRNA1P02708 482 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 OAS2P29728 719 aaKnown RBP19.96■□□□□ 0.79
VEGFA-206ENST00000372077 ACOT2P49753 483 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 MNX1P50219 401 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-206ENST00000372077 DLG4P78352 724 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 ZNF568Q3ZCX4 644 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 ZBTB41Q5SVQ8 909 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 CATSPER4Q7RTX7 472 aa19.96■□□□□ 0.79
VEGFA-206ENST00000372077 SENP6Q9GZR1 1112 aaPredicted RBP19.96■□□□□ 0.79
VEGFA-206ENST00000372077 EFCAB8A8MWE9 144 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 N4BP1O75113 896 aaKnown RBP19.95■□□□□ 0.78
VEGFA-206ENST00000372077 MCF2P10911 925 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 TMEM132AQ24JP5 1023 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 CC2D1AQ6P1N0 951 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-206ENST00000372077 U2AF1L4Q8WU68 220 aaKnown RBP19.95■□□□□ 0.78
VEGFA-206ENST00000372077 KIF5CO60282 957 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 B4GALT4O60513 344 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 TRIM49P0CI25 452 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 TRIM49CP0CI26 452 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 AXLP30530 894 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 PSMD6Q15008 389 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 FAM26DQ5JW98 314 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 CDR2LQ86X02 465 aaPredicted RBP19.95■□□□□ 0.78
VEGFA-206ENST00000372077 PSMB7Q99436 277 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 CPSF3Q9UKF6 684 aaKnown RBP19.95■□□□□ 0.78
VEGFA-206ENST00000372077 NOD1Q9Y239 953 aa19.95■□□□□ 0.78
VEGFA-206ENST00000372077 GTPBP10A4D1E9 387 aaKnown RBP19.94■□□□□ 0.78
VEGFA-206ENST00000372077 CAND2O75155 1236 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 FMO5P49326 533 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 PLEKHA4Q9H4M7 779 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 HARSP12081 509 aaKnown RBP19.94■□□□□ 0.78
VEGFA-206ENST00000372077 THPOP40225 353 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 AGPAT5Q9NUQ2 364 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 DUSP10Q9Y6W6 482 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 LRRIQ3A6PVS8 624 aaPredicted RBP19.94■□□□□ 0.78
VEGFA-206ENST00000372077 CLDN10P78369 228 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 CYP27A1Q02318 531 aa19.94■□□□□ 0.78
VEGFA-206ENST00000372077 NOC2LQ9Y3T9 749 aaKnown RBP19.94■□□□□ 0.78
VEGFA-206ENST00000372077 PMM2O15305 246 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 TNFSF9P41273 254 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 PPP3CAQ08209 521 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 SEZ6Q53EL9 994 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 USP37Q86T82 979 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 FAM228AQ86W67 206 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 BRSK2Q8IWQ3 736 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 NOA1Q8NC60 698 aaKnown RBP19.93■□□□□ 0.78
VEGFA-206ENST00000372077 NUP58Q9BVL2 599 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 RBAKQ9NYW8 714 aaPredicted RBP19.93■□□□□ 0.78
VEGFA-206ENST00000372077 TTC26A0AVF1 554 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 ZRANB2O95218 330 aaKnown RBP eCLIP19.93■□□□□ 0.784e-17■■□□□ 11.4
VEGFA-206ENST00000372077 POU5F1Q01860 360 aaKnown RBP19.93■□□□□ 0.78
VEGFA-206ENST00000372077 TRIM14Q14142 442 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 CBWD6Q4V339 395 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 FIGNQ5HY92 759 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 CBWD3Q5JTY5 395 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 CBWD5Q5RIA9 395 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 TTYH3Q9C0H2 523 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 ABHD10Q9NUJ1 306 aa19.93■□□□□ 0.78
VEGFA-206ENST00000372077 P4HA2O15460 535 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 CTSHP09668 335 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 GTF2H1P32780 548 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 KCNJ6P48051 423 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 DNA2P51530 1060 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 WNT7BP56706 349 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 NOTUMQ6P988 496 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 GSPT2Q8IYD1 628 aaKnown RBP19.92■□□□□ 0.78
VEGFA-206ENST00000372077 CCDC127Q96BQ5 260 aa19.92■□□□□ 0.78
VEGFA-206ENST00000372077 GJA8P48165 433 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms