RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CCDC172P0C7W6 258 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 MFAP3P55082 362 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 BMS1Q14692 1282 aaKnown RBP18.93■□□□□ 0.62
SSBP3-203ENST00000371319 NAB2Q15742 525 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 DEFB115Q30KQ5 88 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 ZNF568Q3ZCX4 644 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 C10orf76Q5T2E6 689 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 FAM71AQ8IYT1 594 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 OR5B17Q8NGF7 314 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 SHC3Q92529 594 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 PI4K2AQ9BTU6 479 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 PACSIN1Q9BY11 444 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 SALL4Q9UJQ4 1053 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 FLT3LGP49771 235 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 ADAM17P78536 824 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 FSCN1Q16658 493 aaKnown RBP18.92■□□□□ 0.62
SSBP3-203ENST00000371319 MFSD14CQ5VZR4 134 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 RUFY4Q6ZNE9 571 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 ZNF410Q86VK4 478 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 CDR2LQ86X02 465 aaPredicted RBP18.92■□□□□ 0.62
SSBP3-203ENST00000371319 PPM1KQ8N3J5 372 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 LRRN4CLQ8ND94 238 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 NLRP7Q8WX94 980 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 ADAMTS10Q9H324 1103 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 PDZD7Q9H5P4 517 aa18.92■□□□□ 0.62
SSBP3-203ENST00000371319 LUC7LQ9NQ29 371 aaKnown RBP18.92■□□□□ 0.62
SSBP3-203ENST00000371319 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 GPR25O00155 361 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 DUSP11O75319 330 aaKnown RBP18.91■□□□□ 0.62
SSBP3-203ENST00000371319 MOCS3O95396 460 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 PIK3CAP42336 1068 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 CHMP4BP1P59074 171 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 PRKCZQ05513 592 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 TMEM132AQ24JP5 1023 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 VPS36Q86VN1 386 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 WDR49Q8IV35 697 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
SSBP3-203ENST00000371319 TSC1Q92574 1164 aa18.91■□□□□ 0.62
SSBP3-203ENST00000371319 SMIM35A0A1B0GVV1 85 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 DYNC1I1O14576 645 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 TSPAN1O60635 241 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 AP3M2P53677 418 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 PURAQ00577 322 aaKnown RBP18.9■□□□□ 0.62
SSBP3-203ENST00000371319 AMPD2Q01433 879 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 GCNT1Q02742 428 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 BIRC3Q13489 604 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 SURF1Q15526 300 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 ALKBH5Q6P6C2 394 aaKnown RBP18.9■□□□□ 0.62
SSBP3-203ENST00000371319 THNSL1Q8IYQ7 743 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 CEP120Q8N960 986 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 SLC20A1Q8WUM9 679 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 CPB2Q96IY4 423 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 AGPAT1Q99943 283 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 UPF3AQ9H1J1 476 aaKnown RBP18.9■□□□□ 0.62
SSBP3-203ENST00000371319 CAPN6Q9Y6Q1 641 aa18.9■□□□□ 0.62
SSBP3-203ENST00000371319 BTNL10A8MVZ5 291 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 GPR32O75388 356 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 MCF2P10911 925 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 CYP2C9P11712 490 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 ARF4P18085 180 aaPredicted RBP18.89■□□□□ 0.62
SSBP3-203ENST00000371319 GJA9P57773 515 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 TRIM32Q13049 653 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 SCARA3Q6AZY7 606 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 ENOSF1Q7L5Y1 443 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 GLYCTKQ8IVS8 523 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 RNF10Q8N5U6 811 aaKnown RBP18.89■□□□□ 0.62
SSBP3-203ENST00000371319 U2AF1L4Q8WU68 220 aaKnown RBP18.89■□□□□ 0.62
SSBP3-203ENST00000371319 ERO1AQ96HE7 468 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 KATNAL1Q9BW62 490 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 FAM49AQ9H0Q0 323 aaPredicted RBP18.89■□□□□ 0.62
SSBP3-203ENST00000371319 APOBEC3GQ9HC16 384 aaKnown RBP18.89■□□□□ 0.62
SSBP3-203ENST00000371319 CREBZFQ9NS37 354 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 C1orf112Q9NSG2 853 aa18.89■□□□□ 0.62
SSBP3-203ENST00000371319 TRIP12Q14669 1992 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-203ENST00000371319 TACC1O75410 805 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 SGPL1O95470 568 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 ATP1A1P05023 1023 aaKnown RBP18.89■□□□□ 0.61
SSBP3-203ENST00000371319 TNFAIP3P21580 790 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 HOXC8P31273 242 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 WDR44Q5JSH3 913 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 SPOPLQ6IQ16 392 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 DNAAF5Q86Y56 855 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 TMEM192Q8IY95 271 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 DHX38Q92620 1227 aaKnown RBP18.89■□□□□ 0.61
SSBP3-203ENST00000371319 FAM81BQ96LP2 452 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 SCLT1Q96NL6 688 aa18.89■□□□□ 0.61
SSBP3-203ENST00000371319 NOCTQ9UK39 431 aaKnown RBP18.89■□□□□ 0.61
SSBP3-203ENST00000371319 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CYP26A1O43174 497 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CHRNB2P17787 502 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 USP8P40818 1118 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 OSTNP61366 133 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
SSBP3-203ENST00000371319 SP3Q02447 781 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 TMEM62Q0P6H9 643 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 TUBB2AQ13885 445 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 KIZQ2M2Z5 673 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 PAPD7Q5XG87 772 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms