RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 BIN1O00499 593 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 GRM6O15303 877 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 CLDN3O15551 220 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 MCM4P33991 863 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 FAM189BP81408 668 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 STK4Q13043 487 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 BTG3Q14201 252 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 SMRP1Q8NCR6 262 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 ATOH1Q92858 354 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 CLP1Q92989 425 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 RNF19AQ9NV58 838 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 FAM86C1Q9NVL1 165 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 RMND1Q9NWS8 449 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 KLK14Q9P0G3 267 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 TNFSF13BQ9Y275 285 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 PCDHA5Q9Y5H7 936 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 TTC3P53804 2025 aa11.7□□□□□ -0.54
EXOSC1-203ENST00000370886 LOC730098B7Z3J9 87 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 TOM1L1O75674 476 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 SCP2P22307 547 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 ABCD1P33897 745 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 NUBP1P53384 320 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 PSMD2Q13200 908 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 ADAM15Q13444 863 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 ALCAMQ13740 583 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 CBX2Q14781 532 aaPredicted RBP11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 DCAF4L1Q3SXM0 396 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 GLB1LQ6UWU2 654 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 ZPBP2Q6X784 338 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 MAP4K3Q8IVH8 894 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 SMYD4Q8IYR2 804 aaPredicted RBP11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 SMG8Q8ND04 991 aaKnown RBP11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 POMGNT1Q8WZA1 660 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 HVCN1Q96D96 273 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 MSLNLQ96KJ4 702 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 MSTO1Q9BUK6 570 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 CDT1Q9H211 546 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 ST6GALNAC4Q9H4F1 302 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 TMEM206Q9H813 350 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 SNTG2Q9NY99 539 aa11.69□□□□□ -0.54
EXOSC1-203ENST00000370886 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 PLXNA3P51805 1871 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 LINC01565O15544 149 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 HOXA2O43364 376 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 ZNF623O75123 536 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 DGKIO75912 1065 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 CSPG5O95196 566 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 EOMESO95936 686 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 POMCP01189 267 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 LINC00271P0C7V0 271 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 MCF2P10911 925 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 MLH1P40692 756 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 YARSP54577 528 aaKnown RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 RNASELQ05823 741 aaKnown RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 NOLC1Q14978 699 aaKnown RBP eCLIP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 FAM43BQ6ZT52 329 aaPredicted RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 EFHBQ8N7U6 833 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 CEP120Q8N960 986 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 KIAA0895Q8NCT3 520 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 URGCPQ8TCY9 931 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 SCFD1Q8WVM8 642 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 P2RX5Q93086 422 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 GAD1Q99259 594 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 CCDC94Q9BW85 323 aaPredicted RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 PHF7Q9BWX1 381 aaPredicted RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 MAN1B1Q9UKM7 699 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 EVPLQ92817 2033 aa11.68□□□□□ -0.54
EXOSC1-203ENST00000370886 FSD2A1L4K1 749 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 GOLGA8IPA6NC78 632 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 GOLGA8JA6NMD2 632 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 CLIC2O15247 247 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 PPP1R37O75864 691 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 RHOBTB3O94955 611 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 MBD3O95983 291 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 AVPR2P30518 371 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 HOXD13P35453 343 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 AFF1P51825 1210 aaKnown RBP11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 EHHADHQ08426 723 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 KCNB1Q14721 858 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 SLFN12LQ6IEE8 588 aa11.67□□□□□ -0.54
EXOSC1-203ENST00000370886 SLC39A4Q6P5W5 647 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms