RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 NDUFA13Q9P0J0 144 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SCHIP1Q9P0W5 487 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 AURKCQ9UQB9 309 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 HEY1Q9Y5J3 304 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 F5H423 210 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 GNPATO15228 680 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TLR3O15455 904 aaKnown RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 ITGA4P13612 1032 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TCN1P20061 433 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 STAT3P40763 770 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 MAGEB18Q96M61 343 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 AIM2O14862 343 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 PRPSAP2O60256 369 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 R3HDM1Q15032 1099 aaKnown RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 LRRC8EQ6NSJ5 796 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 ARID3BQ8IVW6 561 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 SLC30A5Q8TAD4 765 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 TMEM47Q9BQJ4 181 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 KLHDC7AQ5VTJ3 777 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 DDHD1Q8NEL9 900 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 SCG3Q8WXD2 468 aaKnown RBP13.4□□□□□ -0.26
GPC4-201ENST00000370828 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 KCNK16Q96T55 309 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 PCSK1NQ9UHG2 260 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
GPC4-201ENST00000370828 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 ZBED4O75132 1171 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 ALAS1P13196 640 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 SSTR3P32745 418 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 SCARA5Q6ZMJ2 495 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 TATDN2Q93075 761 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CYP26A1O43174 497 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CLPTM1O96005 669 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CALB2P22676 271 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 PTPN4P29074 926 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 COILP38432 576 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 TOB1P50616 345 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 HDAC4P56524 1084 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 KLC3Q6P597 504 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 TLR10Q9BXR5 811 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 BARHL2Q9NY43 387 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 NEMP1O14524 444 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 DDHD2O94830 711 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 PPP6R3Q5H9R7 873 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 PDZD4Q76G19 769 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 TMA16Q96EY4 203 aaKnown RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 MTA3Q9BTC8 594 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 ZCWPW1Q9H0M4 648 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 METP08581 1390 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 SCNN1DP51172 638 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 POLGP54098 1239 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 ITKQ08881 620 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 IL1RAPL1Q9NZN1 696 aa13.39□□□□□ -0.27
GPC4-201ENST00000370828 RABL2AQ9UBK7 228 aaPredicted RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 MRPL11Q9Y3B7 192 aaKnown RBP13.39□□□□□ -0.27
GPC4-201ENST00000370828 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms