RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.45□□□□□ -1.227e-9■■■□□ 18.5
CSDE1-204ENST00000369530 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 KCNK18Q7Z418 384 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 FSIP1Q8NA03 581 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 GORASP1Q9BQQ3 440 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 TPX2Q9ULW0 747 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 PPP2R2CQ9Y2T4 447 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 IRAK3Q9Y616 596 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 TICRRQ7Z2Z1 1910 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 MIA3Q5JRA6 1907 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 IKBKBO14920 756 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 OATP04181 439 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 CYP2C18P33260 490 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 PTGISQ16647 500 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 WHAMMP3Q1A5X7 153 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 CCAR1Q8IX12 1150 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 ENGASEQ8NFI3 743 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 COG1Q8WTW3 980 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 BCL7CQ8WUZ0 217 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 USP28Q96RU2 1077 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 WDR24Q96S15 920 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 SLC9A7Q96T83 725 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 TSGA10Q9BZW7 698 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 NAT10Q9H0A0 1025 aaKnown RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 TP53BP1Q12888 1972 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 ABHD14A-ACY1A0A1B0GW23 586 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA8KD6RF30 607 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 FECHP22830 423 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 VSNL1P62760 191 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 CLDN10P78369 228 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 SGSM1Q2NKQ1 1148 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 NUGGCQ68CJ6 796 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 KRT40Q6A162 431 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 PSRC1Q6PGN9 363 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-204ENST00000369530 FAM76AQ8TAV0 307 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 C17orf50Q8WW18 174 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 BSNDQ8WZ55 320 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 SUSD6Q92537 303 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 CAPS2Q9BXY5 557 aa7.45□□□□□ -1.22
CSDE1-204ENST00000369530 LINC01553A4QN01 128 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 EVI5O60447 810 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 VNN2O95498 520 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SFNP31947 248 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 NCKAP1LP55160 1127 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 ZBED6P86452 979 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 GRB10Q13322 594 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 PLS1Q14651 629 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 TSNAXIP1Q2TAA8 658 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 CLLU1OSQ5K130 101 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF365Q70YC5 407 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 REXO1Q8N1G1 1221 aaKnown RBP7.44□□□□□ -1.22
CSDE1-204ENST00000369530 TEX9Q8N6V9 391 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SLC35B4Q969S0 331 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 DHX58Q96C10 678 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 PPP1R14BQ96C90 147 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 C11orf16Q9NQ32 467 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-204ENST00000369530 C15orf41Q9Y2V0 281 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 STX10O60499 249 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 NR1I2O75469 434 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 RPA1P27694 616 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 INHBCP55103 352 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 KRT76Q01546 638 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 PPIGQ13427 754 aaKnown RBP eCLIP7.44□□□□□ -1.226e-6■□□□□ 9.4
CSDE1-204ENST00000369530 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 DPY19L2P1Q6NXN4 242 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 LZICQ8WZA0 190 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SPATA33Q96N06 139 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 PKMYT1Q99640 499 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SMARCAD1Q9H4L7 1026 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 ERAP1Q9NZ08 941 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 ARHGAP28Q9P2N2 729 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 KCNJ14Q9UNX9 436 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 TMEM221A6NGB7 291 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 B4DLN1 442 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 CFBP00751 764 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 VIMP08670 466 aaKnown RBP7.44□□□□□ -1.22
CSDE1-204ENST00000369530 XBP1P17861 261 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 MRPS6P82932 125 aaKnown RBP7.44□□□□□ -1.22
CSDE1-204ENST00000369530 GRIN1Q05586 938 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 NCAPHQ15003 741 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 EPHA7Q15375 998 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 COBLL1Q53SF7 1204 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SLC39A4Q6P5W5 647 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 CATSPER3Q86XQ3 398 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 MYLK4Q86YV6 388 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-204ENST00000369530 HERC6Q8IVU3 1022 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 TRIM42Q8IWZ5 723 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 BCAS4Q8TDM0 211 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 DNAJC19Q96DA6 116 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 SPAG5Q96R06 1193 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 TUFT1Q9NNX1 390 aa7.44□□□□□ -1.22
CSDE1-204ENST00000369530 KIAA0100Q14667 2235 aaKnown RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 A0A1B0GVL5 298 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 LRRC10BA6NIK2 292 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ZBTB39O15060 712 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 EYA4O95677 639 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms